Pig1-61O17
|
GCTTTTTGTTTTTCCATTGAGCACTAAAAATGCTTTTTTTCTCTGATGAAGGAAAGAGGC
CTGTTGACACCTTCAGGATACACAATTCCAATCCCTCAATTTATTTCAAATGGTCTTACC
TTGAATTGTCTGTGTAGCTGACCATGAAAATTAAAGTGTGAAGAGAGTGCAAAGGCCTGA
TATCCAAAAACCTTTGGATCAGGCTTATGAGTCAGATTACATGTACATTGGTTGAGCCAT
AGCTCAGAGGAGAGAAGGGAAACAAGCTGCCAAGAGAAAAGTAGGGTGGGAGGGAGAATT
GGCCCACTTCTTTAGCTCAGCCTAGCAGCTGAAAAGAGTCAGCAGACCTGGAATAAGAGG
TTTTCCTGTTTATGAGAACTTCCTTGGAAATTTCTACCTCCATTCCCCCTGCCCTGGCCG
CTCTCTAGCTTAATTAACCACGATCAGGTTTCATGCAATATGCTTCTCTTTAGTCATCGG
TGTTGGGTCAGCTTAGACTGAACACTCCCACTACCAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCTTTTTGTTTTTCCATTGAGCACTAAAAATGCTTTTTTTCTCTGATGAAGGAAAGAGGC
CTGTTGACACCTTCAGGATACACAATTCCAATCCCTCAATTTATTTCAAATGGTCTTACC
TTGAATTGTCTGTGTAGCTGACCATGAAAATTAAAGTGTGAAGAGAGTGCAAAGGCCTGA
TATCCAAAAACCTTTGGATCAGGCTTATGAGTCAGATTACATGTACATTGGTTGAGCCAT
AGCTCAGAGGAGAGAAGGGAAACAAGCTGCCAAGAGAAAAGTAGGGTGGGAGGGAGAATT
GGCCCACTTCTTTAGCTCAGCCTAGCAGCTGAAAAGAGTCAGCAGACCTGGAATAAGAGG
TTTTCCTGTTTATGAGAACTTCCTTGGAAATTTCTACCTCCATTCCCCCTGCCCTGGCCG
CTCTCTAGCTTAATTAACCACGATCAGGTTTCATGCAATATGCTTCTCTTTAGTCATCGG
TGTTGGGTCAGCTTAGACTGAACACTCCCACTACCAG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
50-513, gnl|bosTau2|chr1 (100468489-100468032) |
|
50-513, gnl|canFam2|chr23 (29608134-29607711) |
|
50-513, gnl|dasNov1|scaffold_42580 (510-887) |
|
50-513, gnl|echTel1|scaffold_303526 (778-1175) |
|
50-513, gnl|hg17|chr3 (16244339-16244804) |
|
50-513, gnl|Hg17|chr3 (16244338-16244803) |
|
50-513, gnl|loxAfr1|scaffold_16211 (6579-6993) |
|
50-513, gnl|mm7|chr14 (29488470-29488887) |
|
50-513, gnl|Mm7|chr14 (29488467-29488920) |
|
50-513, gnl|panTro1|chr2 (16860703-16861168) |
|
50-513, gnl|rheMac2|chr2 (158544880-158545345) |
|
50-513, gnl|rn3|chr16 (7517840-7518255) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
50-513, gnl|bosTau2|chr1 (100468489-100468032) |
|
50-513, gnl|canFam2|chr23 (29608134-29607711) |
|
50-513, gnl|dasNov1|scaffold_42580 (510-887) |
|
50-513, gnl|echTel1|scaffold_303526 (778-1175) |
|
50-513, gnl|hg17|chr3 (16244339-16244804) |
|
50-513, gnl|Hg17|chr3 (16244338-16244803) |
|
50-513, gnl|loxAfr1|scaffold_16211 (6579-6993) |
|
50-513, gnl|mm7|chr14 (29488470-29488887) |
|
50-513, gnl|Mm7|chr14 (29488467-29488920) |
|
50-513, gnl|panTro1|chr2 (16860703-16861168) |
|
50-513, gnl|rheMac2|chr2 (158544880-158545345) |
|
50-513, gnl|rn3|chr16 (7517840-7518255) |
