Non-Coding RNA Search

Pig1-62J18

Sequence:


               
               GGTTCTAGATCGCGAGCGCCGCCCTTTTTTTTTTTTTTTGGAAAGGAATTTTTTTATAAC
TTTGAAAAGTCTCCAAAAATGCTTTTTTAAAAACTTAAAAAAAAGTTTGAAACCGGGGGG
GGGCTTTTTCCTACAGGAACCCCTCAAAAAACCACAGCTTATTTTTTCAGGTTCTGCACA
AAAGGTTTATTGGCTCCTTTTGGAAAGGGCCCCCTCCCACCGTTTGTCCAGGAGCTGCCT
TTAAACCCAGGTTTGGGTTCCCCCACCTTTGGGTTGATCATTTTGTCCCCTGAGTGTCTG
ACCCCCTGGCAAATAATGTTAACTCGGCATCGGGGGGCACCAGGTTGCTTTGGAAAATTT
TGAGGATGGGGTTCTCAATCACCTGTTGCCCTGGGAACAGGACAGGGGAAAGGGGGGCTT
GACCTAAACAGGGGTTGAAGTCACAGGCCAACCCGAACCTTTTTTTAGGGTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTTCTAGATCGCGAGCGCCGCCCTTTTTTTTTTTTTTTGGAAAGGAATTTTTTTATAAC
TTTGAAAAGTCTCCAAAAATGCTTTTTTAAAAACTTAAAAAAAAGTTTGAAACCGGGGGG
GGGCTTTTTCCTACAGGAACCCCTCAAAAAACCACAGCTTATTTTTTCAGGTTCTGCACA
AAAGGTTTATTGGCTCCTTTTGGAAAGGGCCCCCTCCCACCGTTTGTCCAGGAGCTGCCT
TTAAACCCAGGTTTGGGTTCCCCCACCTTTGGGTTGATCATTTTGTCCCCTGAGTGTCTG
ACCCCCTGGCAAATAATGTTAACTCGGCATCGGGGGGCACCAGGTTGCTTTGGAAAATTT
TGAGGATGGGGTTCTCAATCACCTGTTGCCCTGGGAACAGGACAGGGGAAAGGGGGGCTT
GACCTAAACAGGGGTTGAAGTCACAGGCCAACCCGAACCTTTTTTTAGGGTAT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               171-290, - strand, RNAz p=0.963236

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               171-290, - strand, RNAz p=0.963236

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of CR622780, -

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of CR622780, -

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               142-461, gnl|bosTau2|chr7 (2632350-2632027)
               

               
               142-461, gnl|Hg17|chr19 (19173715-19173381)
               

               
               142-461, gnl|Mm7|chr8 (68588445-68588705)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               142-461, gnl|bosTau2|chr7 (2632350-2632027)
               

               
               142-461, gnl|Hg17|chr19 (19173715-19173381)
               

               
               142-461, gnl|Mm7|chr8 (68588445-68588705)

	142-461, gnl\|bosTau2\|chr7 (2632350-2632027)
	142-461, gnl\|Hg17\|chr19 (19173715-19173381)
	142-461, gnl\|Mm7\|chr8 (68588445-68588705)