Non-Coding RNA Search

Pig1-62L14

Sequence:


               
               GGAAATTTTAACATTGAATGTTAAAAATGAACTCTACCAAagttccctggtggtctagag
gtaaaggatccagtgttgtcactgctgtagtgcgggttctatccctggcctgggaatttc
cacatgccttgggtatgTGGCCCCCAAAAAGAACTCTACCAATTATAAATGAGTTAATCA
CTTAACAAAATTATTAATTTTCCAGGGACATTATCATCCTGTACACAGTTTTTCTTAATG
TGTACTATTAAGTAATGAAATTTGTTTATGTGTGTATATATATTTTTTTAAATAAGTTGC
AGCATTTTCAACGTGCTGATAGTTGTCCTTGATAATATACATGAAAATCATCTTGAAATT
TGTTTCTACTGAAAAAAGAAACATGAACTCTGTGATATGTTTCCAAAATTAATATCAGTT
TTCAGGAACTTAAATGTCACTTACATTTTGGCATTTTTGCAAATAGAATTTCATGCCTTG
TTTGCTTTTTGATTTAATTTTTAAAGCAGCAATTATAAAAACAATTGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAATTTTAACATTGAATGTTAAAAATGAACTCTACCAAagttccctggtggtctagag
gtaaaggatccagtgttgtcactgctgtagtgcgggttctatccctggcctgggaatttc
cacatgccttgggtatgTGGCCCCCAAAAAGAACTCTACCAATTATAAATGAGTTAATCA
CTTAACAAAATTATTAATTTTCCAGGGACATTATCATCCTGTACACAGTTTTTCTTAATG
TGTACTATTAAGTAATGAAATTTGTTTATGTGTGTATATATATTTTTTTAAATAAGTTGC
AGCATTTTCAACGTGCTGATAGTTGTCCTTGATAATATACATGAAAATCATCTTGAAATT
TGTTTCTACTGAAAAAAGAAACATGAACTCTGTGATATGTTTCCAAAATTAATATCAGTT
TTCAGGAACTTAAATGTCACTTACATTTTGGCATTTTTGCAAATAGAATTTCATGCCTTG
TTTGCTTTTTGATTTAATTTTTAAAGCAGCAATTATAAAAACAATTGGA

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               44-116, tRNA Pseudo, RaveNnA Score=30.22

ncRNA annotation: 1 entry(ies)

Help | Less info

PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               44-116, tRNA Pseudo, RaveNnA Score=30.22