Non-Coding RNA Search

Pig1-66D04

Sequence:


               
               GGCGGGCTGCGCTAGCAGGTCTACGACGCCGAGCGGTACCTCTCAGCCGCCCCCGAGGGC
TGTGACGGAGATGCCTACATAGAAGAGTGACAGCAGCTGGACCAAGTGTTTCACTGCTGA
ACTGGCTCCTCAGGTATCCTGGCTCTGGCAATTGCTATGGGAGATTGGATGACTGTTACT
GATCCAGGTCTGACTTCAGAAAGCAAAAATATCTCTCAATATACCTCAGAAACAAAGATG
TCTCCATCAAGTTTATACTCACAGCAAGTGCTATGTTCTTCAATACCTTTATCAAAAAAC
GTGCACAGTTTTTTTAGTGCCTTCTGCACAGAAGAGAATATTGAACAAAGTATTTCATAT
CTTGATCAGGAATTGACTACTTTTGGATTTCCTTCACTGTATGAAGAATCCCAAGGTAAA
GAGACAAAGAGAAAATTAAATGTAGTTGCTGTTTTAAATTGTATGAATGAGCTGCTTGTA
CTTCAGCGGAAGAACCTTCTAGCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCGGGCTGCGCTAGCAGGTCTACGACGCCGAGCGGTACCTCTCAGCCGCCCCCGAGGGC
TGTGACGGAGATGCCTACATAGAAGAGTGACAGCAGCTGGACCAAGTGTTTCACTGCTGA
ACTGGCTCCTCAGGTATCCTGGCTCTGGCAATTGCTATGGGAGATTGGATGACTGTTACT
GATCCAGGTCTGACTTCAGAAAGCAAAAATATCTCTCAATATACCTCAGAAACAAAGATG
TCTCCATCAAGTTTATACTCACAGCAAGTGCTATGTTCTTCAATACCTTTATCAAAAAAC
GTGCACAGTTTTTTTAGTGCCTTCTGCACAGAAGAGAATATTGAACAAAGTATTTCATAT
CTTGATCAGGAATTGACTACTTTTGGATTTCCTTCACTGTATGAAGAATCCCAAGGTAAA
GAGACAAAGAGAAAATTAAATGTAGTTGCTGTTTTAAATTGTATGAATGAGCTGCTTGTA
CTTCAGCGGAAGAACCTTCTAGCTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55587394|ref|XP_513522.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55587394|ref|XP_513522.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               234-353, - strand, RNAz p=0.679451

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               234-353, - strand, RNAz p=0.679451

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               195-370, gnl|bosTau2|chr3 (44920465-44920640)
               

               
               195-370, gnl|Hg17|chr1 (84848524-84848349)
               

               
               195-370, gnl|Mm7|chr3 (146316829-146317004)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               195-370, gnl|bosTau2|chr3 (44920465-44920640)
               

               
               195-370, gnl|Hg17|chr1 (84848524-84848349)
               

               
               195-370, gnl|Mm7|chr3 (146316829-146317004)

	195-370, gnl\|bosTau2\|chr3 (44920465-44920640)
	195-370, gnl\|Hg17\|chr1 (84848524-84848349)
	195-370, gnl\|Mm7\|chr3 (146316829-146317004)