Pig1-66J04
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGTGCTCACAGGCCAGGCCCCCCGACCCACTGCGCTTATGCCGAGAGCCCTTGAGCCGTG TCCATCGGCCCCCTTCCACCCTGAGGCGGCGTTCAAAGCCAACACCTGGCCCAGAGGAAG GCCCTTCACAAAAGGTGGACCAGGCCCCCCAGCCCACTCTGGTGGTGATGCTAGAAGACA TTGCCAGCCGCAGAGCCCCGGTTGAGGGTTTTGCCGGTGAGACGCCCAACTTCATCGTCC CAGCAAAAAGAGCTGAGCCCATGGTGAGGGTTCACCATCCAAAGCCTCCGCCCAGGGACC TGGAACCCCCATTCCAGCCGCCTGCCATGTCTACAGATCCTCCGGAGAACCCACCACCAG CCCCCGATCCCGTTCTGGAGCGCCCGTCGACCCCTCCGCCATCCAGCCTTTTACGTCCCC GCCTCAGTCCCTGGGGCTTGGCCCCCCTCTTCCATTCCGTCCGCTCCAAGCTGGAGAGAG TTGCCGACATCTTCCTCACGCCCAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGTGCTCACAGGCCAGGCCCCCCGACCCACTGCGCTTATGCCGAGAGCCCTTGAGCCGTG TCCATCGGCCCCCTTCCACCCTGAGGCGGCGTTCAAAGCCAACACCTGGCCCAGAGGAAG GCCCTTCACAAAAGGTGGACCAGGCCCCCCAGCCCACTCTGGTGGTGATGCTAGAAGACA TTGCCAGCCGCAGAGCCCCGGTTGAGGGTTTTGCCGGTGAGACGCCCAACTTCATCGTCC CAGCAAAAAGAGCTGAGCCCATGGTGAGGGTTCACCATCCAAAGCCTCCGCCCAGGGACC TGGAACCCCCATTCCAGCCGCCTGCCATGTCTACAGATCCTCCGGAGAACCCACCACCAG CCCCCGATCCCGTTCTGGAGCGCCCGTCGACCCCTCCGCCATCCAGCCTTTTACGTCCCC GCCTCAGTCCCTGGGGCTTGGCCCCCCTCTTCCATTCCGTCCGCTCCAAGCTGGAGAGAG TTGCCGACATCTTCCTCACGCCCAAC |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 73-207, - strand, RNAz p=0.707571 | |
| 89-207, - strand, RNAz p=0.61013 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 73-207, - strand, RNAz p=0.707571 | |
| 89-207, - strand, RNAz p=0.61013 |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 15-207, gnl|bosTau2|chr25 (25778505-25778313) | |
| 15-207, gnl|canFam2|chr6 (20526196-20525882) | |
| 15-207, gnl|dasNov1|scaffold_268138 (3717-3378) | |
| 15-207, gnl|echTel1|scaffold_306512 (2615-2973) | |
| 15-207, gnl|hg17|chr16 (30571670-30572024) | |
| 15-207, gnl|Hg17|chr16 (30571734-30571926) | |
| 15-207, gnl|loxAfr1|scaffold_32727 (27078-27401) | |
| 15-207, gnl|mm7|chr7 (123570280-123570606) | |
| 15-207, gnl|Mm7|chr7 (123570353-123570545) | |
| 15-207, gnl|monDom2|scaffold_17 (8618969-8619356) | |
| 15-207, gnl|oryCun1|scaffold_188253 (3953-3642) | |
| 15-207, gnl|panTro1|chr18 (31343799-31344153) | |
| 15-207, gnl|rheMac2|chr20 (28722067-28722424) | |
| 15-207, gnl|rn3|chr1 (186881027-186881320) | |
| 358-506, gnl|bosTau2|chr25 (25777387-25777239) | |
| 358-506, gnl|canFam2|chr6 (20525055-20524759) | |
| 358-506, gnl|echTel1|scaffold_295557 (12690-12986) | |
| 358-506, gnl|hg17|chr16 (30573445-30573741) | |
| 358-506, gnl|Hg17|chr16 (30573448-30573596) | |
| 358-506, gnl|loxAfr1|scaffold_55716 (26105-25810) | |
| 358-506, gnl|mm7|chr7 (123571598-123571891) | |
| 358-506, gnl|Mm7|chr7 (123571601-123571749) | |
| 358-506, gnl|monDom2|scaffold_17 (8620791-8621108) | |
| 358-506, gnl|panTro1|chr18 (31345574-31345870) | |
| 358-506, gnl|rheMac2|chr20 (28723617-28723913) | |
| 358-506, gnl|rn3|chr1 (186882279-186882572) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 15-207, gnl|bosTau2|chr25 (25778505-25778313) | |
| 15-207, gnl|canFam2|chr6 (20526196-20525882) | |
| 15-207, gnl|dasNov1|scaffold_268138 (3717-3378) | |
| 15-207, gnl|echTel1|scaffold_306512 (2615-2973) | |
| 15-207, gnl|hg17|chr16 (30571670-30572024) | |
| 15-207, gnl|Hg17|chr16 (30571734-30571926) | |
| 15-207, gnl|loxAfr1|scaffold_32727 (27078-27401) | |
| 15-207, gnl|mm7|chr7 (123570280-123570606) | |
| 15-207, gnl|Mm7|chr7 (123570353-123570545) | |
| 15-207, gnl|monDom2|scaffold_17 (8618969-8619356) | |
| 15-207, gnl|oryCun1|scaffold_188253 (3953-3642) | |
| 15-207, gnl|panTro1|chr18 (31343799-31344153) | |
| 15-207, gnl|rheMac2|chr20 (28722067-28722424) | |
| 15-207, gnl|rn3|chr1 (186881027-186881320) | |
| 358-506, gnl|bosTau2|chr25 (25777387-25777239) | |
| 358-506, gnl|canFam2|chr6 (20525055-20524759) | |
| 358-506, gnl|echTel1|scaffold_295557 (12690-12986) | |
| 358-506, gnl|hg17|chr16 (30573445-30573741) | |
| 358-506, gnl|Hg17|chr16 (30573448-30573596) | |
| 358-506, gnl|loxAfr1|scaffold_55716 (26105-25810) | |
| 358-506, gnl|mm7|chr7 (123571598-123571891) | |
| 358-506, gnl|Mm7|chr7 (123571601-123571749) | |
| 358-506, gnl|monDom2|scaffold_17 (8620791-8621108) | |
| 358-506, gnl|panTro1|chr18 (31345574-31345870) | |
| 358-506, gnl|rheMac2|chr20 (28723617-28723913) | |
| 358-506, gnl|rn3|chr1 (186882279-186882572) |