Non-Coding RNA Search

Pig1-66M15

Sequence:


               
               GCTTTCTAGTTACTTAGGCCCTTGCTATCCTCCTCAGAAGGGATATGTGTGGCTGCTTTG
TTTCTTCGGTTTTGAATAAATTATTATTACTAtttttgctttttacggcctcatgtgtgg
catatggaggttcccagactaggagtaaaattggaattacagctgcgcgggccatgccat
agccacagcaatgcaggaactgagccacatctgcaacctaacccacagctcacagcaatg
ccagatccttaacccactgagcaaggccagggatcgaacctgcaacttcatgattcctag
tcagattcgtttctgctgccctacaacgggaactccAAATAAATTATTTTTTGAGGATGA
GGCAGAATATGGTTAGTTTGAAAGGAGCCATGGTTTTGAGAATAACATAGTTTAAGAATG
AGAACAGTAGTCATGAGATCCTGGTAGACTGTCAGATGCTGGGAAGACTTGGCCATGTGA
CAGCTCCATGTGGATAATGGTGATTGGGGGTTTGTGTTTGTTTTCCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTTTCTAGTTACTTAGGCCCTTGCTATCCTCCTCAGAAGGGATATGTGTGGCTGCTTTG
TTTCTTCGGTTTTGAATAAATTATTATTACTAtttttgctttttacggcctcatgtgtgg
catatggaggttcccagactaggagtaaaattggaattacagctgcgcgggccatgccat
agccacagcaatgcaggaactgagccacatctgcaacctaacccacagctcacagcaatg
ccagatccttaacccactgagcaaggccagggatcgaacctgcaacttcatgattcctag
tcagattcgtttctgctgccctacaacgggaactccAAATAAATTATTTTTTGAGGATGA
GGCAGAATATGGTTAGTTTGAAAGGAGCCATGGTTTTGAGAATAACATAGTTTAAGAATG
AGAACAGTAGTCATGAGATCCTGGTAGACTGTCAGATGCTGGGAAGACTTGGCCATGTGA
CAGCTCCATGTGGATAATGGTGATTGGGGGTTTGTGTTTGTTTTCCTA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               419-524, - strand, RNAz p=0.817055

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               419-524, - strand, RNAz p=0.817055

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               340-528, gnl|bosTau2|chr27 (9631043-9630845)
               

               
               340-528, gnl|Hg17|chr4 (186534786-186534988)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               340-528, gnl|bosTau2|chr27 (9631043-9630845)
               

               
               340-528, gnl|Hg17|chr4 (186534786-186534988)

	340-528, gnl\|bosTau2\|chr27 (9631043-9630845)
	340-528, gnl\|Hg17\|chr4 (186534786-186534988)