Non-Coding RNA Search

Pig1-66O04

Sequence:


               
               GAGCAGCTGCGCTGATAAGTGTCGGGTGGGTGGGAAGTGGATATAGGCAGAGGTTTGGGC
ACCCATGGGTGGCGACGCTGGGGAAGGAGCTGAGAGATGCCAAGACCCAGGTTCCTGCAG
GCAGTGTAGCTGTCCAGGACCTGGGATGCTGATCTCTTTCCTCATCAGGTGCGGTATGGA
CAAGAGGGACAAGTCCAGGGCAGGGGTGGCCGGTCGTACGCCGGCTTCTCGCTCTCCTGG
CCTTCCGATCCCCAGGCCCCCTGGATCTCCACGACCCCCTCCCCCAGTAACCAGCGCGGC
TCTCCGTGTTCTGGGAGCAGCGGGAGCTGCAGGGCGAGGGCCTCTTGCAGAGCGAGCTGG
TGGCATCCGGGCAACTGCTCTCGCGGACGCTTCCCCTAGGGTGGGACAAACGCGGAGCGC
TGGGACAGGCCCCCGAAGCCCAGGTACTCCAGCCTCTTTGCCCCATTCTGATCCCATCTT
CTTGACCCCGATCCTCTGAGGCCCCAGCCTACCCTTTCTTTCCGGGGCACCTGTGTTGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGCAGCTGCGCTGATAAGTGTCGGGTGGGTGGGAAGTGGATATAGGCAGAGGTTTGGGC
ACCCATGGGTGGCGACGCTGGGGAAGGAGCTGAGAGATGCCAAGACCCAGGTTCCTGCAG
GCAGTGTAGCTGTCCAGGACCTGGGATGCTGATCTCTTTCCTCATCAGGTGCGGTATGGA
CAAGAGGGACAAGTCCAGGGCAGGGGTGGCCGGTCGTACGCCGGCTTCTCGCTCTCCTGG
CCTTCCGATCCCCAGGCCCCCTGGATCTCCACGACCCCCTCCCCCAGTAACCAGCGCGGC
TCTCCGTGTTCTGGGAGCAGCGGGAGCTGCAGGGCGAGGGCCTCTTGCAGAGCGAGCTGG
TGGCATCCGGGCAACTGCTCTCGCGGACGCTTCCCCTAGGGTGGGACAAACGCGGAGCGC
TGGGACAGGCCCCCGAAGCCCAGGTACTCCAGCCTCTTTGCCCCATTCTGATCCCATCTT
CTTGACCCCGATCCTCTGAGGCCCCAGCCTACCCTTTCTTTCCGGGGCACCTGTGTTGAC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               365-481, - strand, RNAz p=0.685117

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               365-481, - strand, RNAz p=0.685117

Predicted microRNA(s): 1 entry(ies)

More info

Predicted microRNA(s): 1 entry(ies)

Help | Less info


               
               302-409, - strand, RNAmicro p=0.998895

Predicted microRNA(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               302-409, - strand, RNAmicro p=0.998895

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-540, gnl|bosTau2|chr7 (12550478-12549935)
               

               
               1-540, gnl|Hg17|chr19 (7844762-7844204)
               

               
               1-540, gnl|Mm7|chr8 (4181013-4180359)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-540, gnl|bosTau2|chr7 (12550478-12549935)
               

               
               1-540, gnl|Hg17|chr19 (7844762-7844204)
               

               
               1-540, gnl|Mm7|chr8 (4181013-4180359)

	1-540, gnl\|bosTau2\|chr7 (12550478-12549935)
	1-540, gnl\|Hg17\|chr19 (7844762-7844204)
	1-540, gnl\|Mm7\|chr8 (4181013-4180359)