Non-Coding RNA Search

Pig1-67G10

Sequence:


               
               GCGGACGCGTGGGGGTCATCAGTGCAGAAGGAGGCAGGGTCATGCAGTTGGAGCTCAGCT
CAGCTCATCTGAGGGCTAAAGGTTCTTTGCGACAGGTCGTGTAGCTGGAGCACTGTCCTT
GGAGAGTGGTGGAGCTGAGGCACAGTTTAGAACCAAAGGAGTAGAGAGGGGGCTTGGATT
CCTTTTTGTCTTTAGGTTGGGGACAAGGCAGGCTCAGCGAGGAGCATGTCCACTGAGAGC
GTGGAAGGGAAGTCCAACAGCTCTGGGGACAGAGGACGAGCTCGGAGTTACTCTTTCCTC
AGGGTTGTCCAGCCAATGTTTAACCATAGTATTTTCACTTCTGCAGTCTCACCTGCCGCC
GAGCGCATCCGCTTCATCTTGGGCGAAGAGGATGACAGCCCAGCACCCCCTCAGCTCTTC
ACCGAGCTGGACGAACTGCTGGCCGTGGATGGGCAGGAGATGGAGTGGGAGGAGACAGCC
AGGTGGATTAAGTTTGAAGAGAAAGTGGAGCAGGGTGGGGAGAGGTGGAGCAAGCCCCAC
GTGGCCACGTTGTCCCTTCACAGCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGACGCGTGGGGGTCATCAGTGCAGAAGGAGGCAGGGTCATGCAGTTGGAGCTCAGCT
CAGCTCATCTGAGGGCTAAAGGTTCTTTGCGACAGGTCGTGTAGCTGGAGCACTGTCCTT
GGAGAGTGGTGGAGCTGAGGCACAGTTTAGAACCAAAGGAGTAGAGAGGGGGCTTGGATT
CCTTTTTGTCTTTAGGTTGGGGACAAGGCAGGCTCAGCGAGGAGCATGTCCACTGAGAGC
GTGGAAGGGAAGTCCAACAGCTCTGGGGACAGAGGACGAGCTCGGAGTTACTCTTTCCTC
AGGGTTGTCCAGCCAATGTTTAACCATAGTATTTTCACTTCTGCAGTCTCACCTGCCGCC
GAGCGCATCCGCTTCATCTTGGGCGAAGAGGATGACAGCCCAGCACCCCCTCAGCTCTTC
ACCGAGCTGGACGAACTGCTGGCCGTGGATGGGCAGGAGATGGAGTGGGAGGAGACAGCC
AGGTGGATTAAGTTTGAAGAGAAAGTGGAGCAGGGTGGGGAGAGGTGGAGCAAGCCCCAC
GTGGCCACGTTGTCCCTTCACAGCCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|59859959|gb|AAX09640.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|59859959|gb|AAX09640.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               52-325, + strand, RNAz p=0.969864

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               52-325, + strand, RNAz p=0.969864

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of NM_003759, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of NM_003759, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               13-485, gnl|bosTau2|chr6 (48928621-48929092)
               

               
               13-485, gnl|Hg17|chr4 (72569789-72570260)
               

               
               13-485, gnl|Mm7|chr5 (88999156-88999610)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-485, gnl|bosTau2|chr6 (48928621-48929092)
               

               
               13-485, gnl|Hg17|chr4 (72569789-72570260)
               

               
               13-485, gnl|Mm7|chr5 (88999156-88999610)

	13-485, gnl\|bosTau2\|chr6 (48928621-48929092)
	13-485, gnl\|Hg17\|chr4 (72569789-72570260)
	13-485, gnl\|Mm7\|chr5 (88999156-88999610)