Non-Coding RNA Search

Pig1-68D04

Sequence:


               
               GAACAGAGAAAGCAAATCTAGAATTAAAGGCGGCCTCTTTATCTCGTGTCTCATACCCTC
CCCCACCACACCACCACCTACCCCCAGCAGAAAAAAAACTCAGCTATAGTCACAGTATCT
GAAAGAACTGGTTCAAATTAAATAGCAGAGTGACTGAAAGAAATTTACCCAATAATTGAG
CCAACAAGCTATTAGCCAAATGGTGAGATTGAACTAAAATTAAGGCCTGGCTCATGCCCA
GAAATTGGTGGATTTTACTTTTCAGAGGAGACTAAAAATGCCATTCCTAATTATTACAGT
CACTTTTGGATTATCCAGGTGGTGATCTCTCCTGTGTTTTGGTTCCCTCCCCTGCTACCT
CTCATTGGGCCATTTTATTGGTCATTAGCACTTCCACCAGAGGGCAGACTGAGTAAGCCA
GAGAAGGTAAAAAAAAATCTATCACTTTGGCTACTATTTAGCTACTCTATACTTGACTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAACAGAGAAAGCAAATCTAGAATTAAAGGCGGCCTCTTTATCTCGTGTCTCATACCCTC
CCCCACCACACCACCACCTACCCCCAGCAGAAAAAAAACTCAGCTATAGTCACAGTATCT
GAAAGAACTGGTTCAAATTAAATAGCAGAGTGACTGAAAGAAATTTACCCAATAATTGAG
CCAACAAGCTATTAGCCAAATGGTGAGATTGAACTAAAATTAAGGCCTGGCTCATGCCCA
GAAATTGGTGGATTTTACTTTTCAGAGGAGACTAAAAATGCCATTCCTAATTATTACAGT
CACTTTTGGATTATCCAGGTGGTGATCTCTCCTGTGTTTTGGTTCCCTCCCCTGCTACCT
CTCATTGGGCCATTTTATTGGTCATTAGCACTTCCACCAGAGGGCAGACTGAGTAAGCCA
GAGAAGGTAAAAAAAAATCTATCACTTTGGCTACTATTTAGCTACTCTATACTTGACTGG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               296-411, - strand, RNAz p=0.714423

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               296-411, - strand, RNAz p=0.714423

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-468, gnl|bosTau2|chr19 (32996310-32996766)
               

               
               2-468, gnl|Mm7|chr11 (98355959-98356626)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-468, gnl|bosTau2|chr19 (32996310-32996766)
               

               
               2-468, gnl|Mm7|chr11 (98355959-98356626)

	2-468, gnl\|bosTau2\|chr19 (32996310-32996766)
	2-468, gnl\|Mm7\|chr11 (98355959-98356626)