Pig1-68H10
|
GAAAGCCCTATAATTTTAGCGTGTGAAGGAAACTTGATAAGCCTCTCAGTTATAATGCAG
TTTCTCTTTGTTCTCGCTTTTGTATTTGAAGTTATAACAAGTTAGTGACTTTTTAGAGTT
CTAATAGCTTCTGGAGTGCCAAGTACCTTAGTAAGTAGTGTTTGCATGGTTTATCTCATT
ATTTCTCATTTTAGAAGAAGCTGAGATGTAAAGAGTGCCTTACTTGTCCGAATAGCAGTT
ATTAAGTGGTAGAGCAAGAATTTGAACTTGGGTTGAACTCAGGAGCCTGTGTTCTCAAGT
GCACAGGACTTGCCTGTTTAAAGCAATTAACATGACAACTCATTAACTTTGTGGTGAGCC
ACACGGGGAAGACCGACAACTTGTTAACTTTGGTCTGTTCTATATATTCTTGTGAATTCT
TGTCTTTCGCAAGTGAGTATTCCTCCCCATATTTTTGCTCCATGTGATACATTTTTTAAT
TCTTTATTTTATTTTAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAAAGCCCTATAATTTTAGCGTGTGAAGGAAACTTGATAAGCCTCTCAGTTATAATGCAG
TTTCTCTTTGTTCTCGCTTTTGTATTTGAAGTTATAACAAGTTAGTGACTTTTTAGAGTT
CTAATAGCTTCTGGAGTGCCAAGTACCTTAGTAAGTAGTGTTTGCATGGTTTATCTCATT
ATTTCTCATTTTAGAAGAAGCTGAGATGTAAAGAGTGCCTTACTTGTCCGAATAGCAGTT
ATTAAGTGGTAGAGCAAGAATTTGAACTTGGGTTGAACTCAGGAGCCTGTGTTCTCAAGT
GCACAGGACTTGCCTGTTTAAAGCAATTAACATGACAACTCATTAACTTTGTGGTGAGCC
ACACGGGGAAGACCGACAACTTGTTAACTTTGGTCTGTTCTATATATTCTTGTGAATTCT
TGTCTTTCGCAAGTGAGTATTCCTCCCCATATTTTTGCTCCATGTGATACATTTTTTAAT
TCTTTATTTTATTTTAT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
48-315, gnl|bosTau2|chr14 (17484543-17484814) |
|
48-315, gnl|canFam2|chr29 (16198274-16198524) |
|
48-315, gnl|dasNov1|scaffold_2145 (75860-75607) |
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48-315, gnl|hg17|chr8 (64151080-64151344) |
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48-315, gnl|Hg17|chr8 (64151444-64151156) |
|
48-315, gnl|loxAfr1|scaffold_26300 (4589-4341) |
|
48-315, gnl|oryCun1|scaffold_193023 (1284-1508) |
|
48-315, gnl|panTro1|chr7 (66151764-66152031) |
|
48-315, gnl|rheMac2|chr8 (65634057-65634352) |
| |
|
382-497, gnl|bosTau2|chr14 (17484836-17484951) |
|
382-497, gnl|canFam2|chr29 (16198148-16198270) |
|
382-497, gnl|dasNov1|scaffold_2145 (75979-75864) |
|
382-497, gnl|hg17|chr8 (64150970-64151079) |
|
382-497, gnl|Hg17|chr8 (64151118-64151003) |
|
382-497, gnl|loxAfr1|scaffold_26300 (4685-4590) |
|
382-497, gnl|oryCun1|scaffold_193023 (1171-1280) |
|
382-497, gnl|panTro1|chr7 (66151654-66151763) |
|
382-497, gnl|rheMac2|chr8 (65633947-65634056) |
|
382-497, gnl|rn3|chr5 (34642583-34642396) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
48-315, gnl|bosTau2|chr14 (17484543-17484814) |
|
48-315, gnl|canFam2|chr29 (16198274-16198524) |
|
48-315, gnl|dasNov1|scaffold_2145 (75860-75607) |
|
48-315, gnl|hg17|chr8 (64151080-64151344) |
|
48-315, gnl|Hg17|chr8 (64151444-64151156) |
|
48-315, gnl|loxAfr1|scaffold_26300 (4589-4341) |
|
48-315, gnl|oryCun1|scaffold_193023 (1284-1508) |
|
48-315, gnl|panTro1|chr7 (66151764-66152031) |
|
48-315, gnl|rheMac2|chr8 (65634057-65634352) |
| |
|
382-497, gnl|bosTau2|chr14 (17484836-17484951) |
|
382-497, gnl|canFam2|chr29 (16198148-16198270) |
|
382-497, gnl|dasNov1|scaffold_2145 (75979-75864) |
|
382-497, gnl|hg17|chr8 (64150970-64151079) |
|
382-497, gnl|Hg17|chr8 (64151118-64151003) |
|
382-497, gnl|loxAfr1|scaffold_26300 (4685-4590) |
|
382-497, gnl|oryCun1|scaffold_193023 (1171-1280) |
|
382-497, gnl|panTro1|chr7 (66151654-66151763) |
|
382-497, gnl|rheMac2|chr8 (65633947-65634056) |
|
382-497, gnl|rn3|chr5 (34642583-34642396) |
