Non-Coding RNA Search

Pig1-68P03

Sequence:


               
               CTGGGCCGTGGATGCCGGGACCCAGCCCCCAGGAGGGGCCCACACTANAAGAAAAGGGGG
AAGAGAAGGGAGAAGAGGAGGAGGAGGAACCAGAGAACCCCTACCTGAGCGATGATGAAA
AGCTCCANCGCAGGCGGGAGAAAGCTGGGCCCAGCTCCTTCCAGGACTCCCAACCTGCCC
GGCCCCCCCAGGTCTCTTACTCTCCCCTAGAGATGATGAAGAAGCATGTAGCAGGTGCAA
AGGGCCCCTACTCGGAACTGGGGCCAGAGCGGCACGCAAGCAGCAGGCCCACTTCCCGTC
TTGGAGGCAGCCTTCTCTTTGGGGGGCTGGTACCTGCCCCCAAGGAGGCCCCTGCCTTGG
AACCACTGGGCACAAAACTGGCTGCTCTGCCACCCCACGGGGCACCGGGACTCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGGCCGTGGATGCCGGGACCCAGCCCCCAGGAGGGGCCCACACTANAAGAAAAGGGGG
AAGAGAAGGGAGAAGAGGAGGAGGAGGAACCAGAGAACCCCTACCTGAGCGATGATGAAA
AGCTCCANCGCAGGCGGGAGAAAGCTGGGCCCAGCTCCTTCCAGGACTCCCAACCTGCCC
GGCCCCCCCAGGTCTCTTACTCTCCCCTAGAGATGATGAAGAAGCATGTAGCAGGTGCAA
AGGGCCCCTACTCGGAACTGGGGCCAGAGCGGCACGCAAGCAGCAGGCCCACTTCCCGTC
TTGGAGGCAGCCTTCTCTTTGGGGGGCTGGTACCTGCCCCCAAGGAGGCCCCTGCCTTGG
AACCACTGGGCACAAAACTGGCTGCTCTGCCACCCCACGGGGCACCGGGACTCAG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               277-414, - strand, RNAz p=0.902643

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               277-414, - strand, RNAz p=0.902643

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-414, gnl|bosTau2|chr2 (78194248-78193832)
               

               
               1-414, gnl|Hg17|chr1 (26354868-26354467)
               

               
               1-414, gnl|Mm7|chr4 (133452893-133453282)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-414, gnl|bosTau2|chr2 (78194248-78193832)
               

               
               1-414, gnl|Hg17|chr1 (26354868-26354467)
               

               
               1-414, gnl|Mm7|chr4 (133452893-133453282)

	1-414, gnl\|bosTau2\|chr2 (78194248-78193832)
	1-414, gnl\|Hg17\|chr1 (26354868-26354467)
	1-414, gnl\|Mm7\|chr4 (133452893-133453282)