Non-Coding RNA Search

Pig1-69C05

Sequence:


               
               GGGAGGCTGTACTGTCAGCCGGATGCTGGATGGTAACTGCTGAGAAGAGAGCAGCACGTG
GCTTCTCCGTCGGCAGGCAGAGCTCTTCAGTGCGGTGGGCTCCAGGAGGGCTCTGTGCCT
CTGCTCAGCCGAGCTCCAGTGGAAGCCTANGGAGGCAGGAGAGGTGCGGAGCTGCANCTA
CTGCCCCGCTCCAGAGAGGGCTGGACACTCTCCCTCGGCTGCAGGTGCAGGAGCAGCCGG
GCTTACCTCCACCTGAGCCATGCCGGCCAGCCTCACAGAGGACAGCCCAGTGACCAACGG
GACCGAGCAGGCGCCGGATTCTCCGGTCCTTTGCACTGCAACAGTGACTTTCACTGCAGT
ANCGGAAGGAGAGGAGTGGGGGTCCTTCTACTACTCCTTTAAGACTGAGCAGTTGATAAC
TCTGTGGGTCCTCTTTGTTTTCACCATTGGTGGAAATGCCGTCGTGCTGTTCTCTACATG
GAGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGAGGCTGTACTGTCAGCCGGATGCTGGATGGTAACTGCTGAGAAGAGAGCAGCACGTG
GCTTCTCCGTCGGCAGGCAGAGCTCTTCAGTGCGGTGGGCTCCAGGAGGGCTCTGTGCCT
CTGCTCAGCCGAGCTCCAGTGGAAGCCTANGGAGGCAGGAGAGGTGCGGAGCTGCANCTA
CTGCCCCGCTCCAGAGAGGGCTGGACACTCTCCCTCGGCTGCAGGTGCAGGAGCAGCCGG
GCTTACCTCCACCTGAGCCATGCCGGCCAGCCTCACAGAGGACAGCCCAGTGACCAACGG
GACCGAGCAGGCGCCGGATTCTCCGGTCCTTTGCACTGCAACAGTGACTTTCACTGCAGT
ANCGGAAGGAGAGGAGTGGGGGTCCTTCTACTACTCCTTTAAGACTGAGCAGTTGATAAC
TCTGTGGGTCCTCTTTGTTTTCACCATTGGTGGAAATGCCGTCGTGCTGTTCTCTACATG
GAGGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|34596870|gb|AAQ76969.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|34596870|gb|AAQ76969.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               57-210, + strand, RNAz p=0.998817

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               57-210, + strand, RNAz p=0.998817

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of AY310332, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of AY310332, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               18-403, gnl|bosTau2|chr4 (35109693-35109308)
               

               
               18-403, gnl|Hg17|chr7 (34471056-34471411)
               

               
               18-403, gnl|Mm7|chr9 (23977451-23977843)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-403, gnl|bosTau2|chr4 (35109693-35109308)
               

               
               18-403, gnl|Hg17|chr7 (34471056-34471411)
               

               
               18-403, gnl|Mm7|chr9 (23977451-23977843)

	18-403, gnl\|bosTau2\|chr4 (35109693-35109308)
	18-403, gnl\|Hg17\|chr7 (34471056-34471411)
	18-403, gnl\|Mm7\|chr9 (23977451-23977843)