Non-Coding RNA Search

Pig1-69I10

Sequence:


               
               GGCCAGTTTTAATTCTTAAAACATGGAGTGCAATTGGTTATTACTTTTAAGTTTGAAAGT
CTTACTTTTTGTTTTTTATCATGTTTCCTTTTAAAAGAGGAATAAACATTCCCTTAAGAC
CTGGTCATGAATTATTGACTTTGTGAAGTTGAATATAACTAGGAAATTCAGAAAAGACGA
AAAAGGATTGGATTTTTACCATTCGATTAATGATTCTCCTGTTCCCAAAGAGATTTGTCT
TAGTGATTTCTAATTGGTTTTGAGTTTGTGGAATCTGCCTTTATAATAAACTCTAAAATT
GGATAACTTGGATGTTTGAATATTGAATAAACTGAAATTTTAGGCAGGTGAAAGCCCGAT
TCTTTAATAATATGCTTTTCCATTGAAATGCACCATAGCACAATAGTCAAATTTCAGAGT
TGGTAAGTTACAGATAATAGGAGTAAAATGACACCTTGGTTAATAAATCCTCTGGGAGCA
AAAAGCTCCTTTATAGAAAGTTGGCCTGGGTGTTAGAGCTCCCATTCCAGTCTCTTCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCAGTTTTAATTCTTAAAACATGGAGTGCAATTGGTTATTACTTTTAAGTTTGAAAGT
CTTACTTTTTGTTTTTTATCATGTTTCCTTTTAAAAGAGGAATAAACATTCCCTTAAGAC
CTGGTCATGAATTATTGACTTTGTGAAGTTGAATATAACTAGGAAATTCAGAAAAGACGA
AAAAGGATTGGATTTTTACCATTCGATTAATGATTCTCCTGTTCCCAAAGAGATTTGTCT
TAGTGATTTCTAATTGGTTTTGAGTTTGTGGAATCTGCCTTTATAATAAACTCTAAAATT
GGATAACTTGGATGTTTGAATATTGAATAAACTGAAATTTTAGGCAGGTGAAAGCCCGAT
TCTTTAATAATATGCTTTTCCATTGAAATGCACCATAGCACAATAGTCAAATTTCAGAGT
TGGTAAGTTACAGATAATAGGAGTAAAATGACACCTTGGTTAATAAATCCTCTGGGAGCA
AAAAGCTCCTTTATAGAAAGTTGGCCTGGGTGTTAGAGCTCCCATTCCAGTCTCTTCTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               430-539, + strand, RNAz p=0.52473

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               430-539, + strand, RNAz p=0.52473

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-539, gnl|bosTau2|chrX (80829-80289)
               

               
               2-539, gnl|Hg17|chrX (116871257-116870730)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-539, gnl|bosTau2|chrX (80829-80289)
               

               
               2-539, gnl|Hg17|chrX (116871257-116870730)

	2-539, gnl\|bosTau2\|chrX (80829-80289)
	2-539, gnl\|Hg17\|chrX (116871257-116870730)