Non-Coding RNA Search

Pig1-70I09

Sequence:


               
               TGTCACCTGCGTCCCTTCGAGAGAGCGAGTGCCAGTGGCCAGGCTGTGCCCGAGTGTACT
TCTCCTTCATCAATGCTTCCTTCCCGGCTTGTGGAGCCCTCAAACCCCGGGATCTCTGCT
TCCCTGAGGCAAGCCTGTCCTTCCGCATTCGGGAGAATAGGCCTCCTGGAACCTTCCACC
AATTCCGCCTGCTGCCTGTACAGTTCCTCTGCCCCAACGTCAGTGTAGCCTACAGCCTCC
TGGGAGGTGAGAGTCAGCCCTTCCGCTGCGCCGCCGACAGCCTGGAGGTGAGCACGCGCT
GGGCCCTGGACCGTGAGCAGCGGGAGAAGTATGAGCTGGTGGCCGCGTGCACTGTGCGTG
TGGGCGCACGTGAGGAGGAGGTGATGGTGCCCTTCCCCGTGACGGTGTACGACGAGGACG
ACTGTGCGCCCACCTTCCTCGGGGGCATCAACACTGCCAGCGCAATGGTGGAGTACAAAC
GAAAGGAGGGCACTGTGGTGGCCACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTCACCTGCGTCCCTTCGAGAGAGCGAGTGCCAGTGGCCAGGCTGTGCCCGAGTGTACT
TCTCCTTCATCAATGCTTCCTTCCCGGCTTGTGGAGCCCTCAAACCCCGGGATCTCTGCT
TCCCTGAGGCAAGCCTGTCCTTCCGCATTCGGGAGAATAGGCCTCCTGGAACCTTCCACC
AATTCCGCCTGCTGCCTGTACAGTTCCTCTGCCCCAACGTCAGTGTAGCCTACAGCCTCC
TGGGAGGTGAGAGTCAGCCCTTCCGCTGCGCCGCCGACAGCCTGGAGGTGAGCACGCGCT
GGGCCCTGGACCGTGAGCAGCGGGAGAAGTATGAGCTGGTGGCCGCGTGCACTGTGCGTG
TGGGCGCACGTGAGGAGGAGGTGATGGTGCCCTTCCCCGTGACGGTGTACGACGAGGACG
ACTGTGCGCCCACCTTCCTCGGGGGCATCAACACTGCCAGCGCAATGGTGGAGTACAAAC
GAAAGGAGGGCACTGTGGTGGCCACA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|36001|emb|CAA33333.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|36001|emb|CAA33333.1|

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               80-199, - strand, RNAz p=0.739042

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               80-199, - strand, RNAz p=0.739042

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-259, gnl|bosTau2|chr28 (8837399-8837141)
               

               
               1-259, gnl|Hg17|chr10 (42917838-42918096)
               

               
               1-259, gnl|Mm7|chr6 (118207531-118207273)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-259, gnl|bosTau2|chr28 (8837399-8837141)
               

               
               1-259, gnl|Hg17|chr10 (42917838-42918096)
               

               
               1-259, gnl|Mm7|chr6 (118207531-118207273)

	1-259, gnl\|bosTau2\|chr28 (8837399-8837141)
	1-259, gnl\|Hg17\|chr10 (42917838-42918096)
	1-259, gnl\|Mm7\|chr6 (118207531-118207273)