Non-Coding RNA Search

Pig1-70M02

Sequence:


               
               TCCGAAAGGATCCAATCAGTTAGCAAGCAGAATAGTCTCCTTCCCTGTGGTTCTGCCTCA
CTGGTCCTGGCGTAGCCACTATTAGGGCCCTAGAGGCACCTAACACAGCTTACCCCTGGG
GTGGAGAACCCACTTGCTGCTTATCCTAGGTTTCCACAGTTCTCTCTGGGTTTGACTACA
AGGTTCTCCTTGAGGGAGTTTCAGGTTTTAGTCCCACCTCTGAGCTTTCACATGTGTTAT
TCCAGCCCCAGGAATGTTTTTTCCACTCTGATCACTGAGTTATCATCACCTGTGTGTCCT
TTGAGTGAAGTTATCTGTTGCTTTTCTGGATGCCTGATCTCAGTCCCTGGTACTTCATCA
TAGCCTTTAACACAAAATTTTTGTGCATAGGTATTTGTTTAATATGTCTTTCACTAAATT
GAAGGCTTCATTGGGGCAAGTTTATTCTCGGCTGTACCTCAGCATCTGGTGTATAGTATG
TACTCTGTGCATAGTTGATTTTGTTCTTGCCATCTTTCAATTGGCTCTTCCTAGACCCTC
ACAACACTTTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCGAAAGGATCCAATCAGTTAGCAAGCAGAATAGTCTCCTTCCCTGTGGTTCTGCCTCA
CTGGTCCTGGCGTAGCCACTATTAGGGCCCTAGAGGCACCTAACACAGCTTACCCCTGGG
GTGGAGAACCCACTTGCTGCTTATCCTAGGTTTCCACAGTTCTCTCTGGGTTTGACTACA
AGGTTCTCCTTGAGGGAGTTTCAGGTTTTAGTCCCACCTCTGAGCTTTCACATGTGTTAT
TCCAGCCCCAGGAATGTTTTTTCCACTCTGATCACTGAGTTATCATCACCTGTGTGTCCT
TTGAGTGAAGTTATCTGTTGCTTTTCTGGATGCCTGATCTCAGTCCCTGGTACTTCATCA
TAGCCTTTAACACAAAATTTTTGTGCATAGGTATTTGTTTAATATGTCTTTCACTAAATT
GAAGGCTTCATTGGGGCAAGTTTATTCTCGGCTGTACCTCAGCATCTGGTGTATAGTATG
TACTCTGTGCATAGTTGATTTTGTTCTTGCCATCTTTCAATTGGCTCTTCCTAGACCCTC
ACAACACTTTCCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               38-155, + strand, RNAz p=0.978665

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               38-155, + strand, RNAz p=0.978665

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-508, gnl|bosTau2|chr18 (45758438-45758946)
               

               
               4-508, gnl|Hg17|chr19 (46465351-46465857)
               

               
               4-508, gnl|Mm7|chr7 (22526157-22525696)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-508, gnl|bosTau2|chr18 (45758438-45758946)
               

               
               4-508, gnl|Hg17|chr19 (46465351-46465857)
               

               
               4-508, gnl|Mm7|chr7 (22526157-22525696)

	4-508, gnl\|bosTau2\|chr18 (45758438-45758946)
	4-508, gnl\|Hg17\|chr19 (46465351-46465857)
	4-508, gnl\|Mm7\|chr7 (22526157-22525696)