Pig1-70P05
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGTTCAGAGCGGCCTGGACTTCGAGGAGCTGCAGGGGAGCAGCTCAGCTTTGCTGCCGG GCTGGTGTACTCACTGAGTTTGCTGCAGGCCACACTCCACCGTTATGAGCATGCCCTCTC TCAGTGCAGCGTGGATGTGTATAAGAAGGTGGGCAGCCTCTACCCAGAGATGAGTGCCCA CGAGCGCTCCCTGGACTTCCTTATTGAGCTGCTGCACAAGGATCAGCTGGATGAGACTGT CAATGTAGAGCCTCTCACCAAGGCCATCAAGTACTACCAGCATCTGTACAGCATCCACCT CGCTGAACAACCTGAGGACAGTACCATGCAGCTGGCTGACCACATTAAGTTCACGCAGAG TGCCCTGGACTGCATGAGTGTGGAGGTGGGACGGCTGAGGGCCTTCCTCCAGGGTGGGCA GGAGGCCTCGGATATTGCCCTCCTGCTCCGGGACCTGGAAACATCGTGCAGTGATATCCG GCAGTTCTGCAAAAAGATCCGAAGGCGAATGCCAGGGACGGATGCTCCTGGGATCCCAGC TGCACTGGCCTTTGGAGCACAGGTGTCCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGTTCAGAGCGGCCTGGACTTCGAGGAGCTGCAGGGGAGCAGCTCAGCTTTGCTGCCGG GCTGGTGTACTCACTGAGTTTGCTGCAGGCCACACTCCACCGTTATGAGCATGCCCTCTC TCAGTGCAGCGTGGATGTGTATAAGAAGGTGGGCAGCCTCTACCCAGAGATGAGTGCCCA CGAGCGCTCCCTGGACTTCCTTATTGAGCTGCTGCACAAGGATCAGCTGGATGAGACTGT CAATGTAGAGCCTCTCACCAAGGCCATCAAGTACTACCAGCATCTGTACAGCATCCACCT CGCTGAACAACCTGAGGACAGTACCATGCAGCTGGCTGACCACATTAAGTTCACGCAGAG TGCCCTGGACTGCATGAGTGTGGAGGTGGGACGGCTGAGGGCCTTCCTCCAGGGTGGGCA GGAGGCCTCGGATATTGCCCTCCTGCTCCGGGACCTGGAAACATCGTGCAGTGATATCCG GCAGTTCTGCAAAAAGATCCGAAGGCGAATGCCAGGGACGGATGCTCCTGGGATCCCAGC TGCACTGGCCTTTGGAGCACAGGTGTCCG |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 411-512, + strand, RNAz p=0.85771 | |
| 446-564, - strand, RNAz p=0.512222 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 411-512, + strand, RNAz p=0.85771 | |
| 446-564, - strand, RNAz p=0.512222 |
| Aligned organism(s): 53 entry(ies) | More info |
| Aligned organism(s): 53 entry(ies) | Help | Less info |
| 2-111, gnl|bosTau2|chr11 (7954969-7955078) | |
| 2-111, gnl|canFam2|chr17 (51822201-51822110) | |
| 2-111, gnl|danRer3|chrUn (120223223-120223132) | |
| 2-111, gnl|dasNov1|scaffold_13624 (5006-4915) | |
| 2-111, gnl|echTel1|scaffold_310888 (78589-78680) | |
| 2-111, gnl|fr1|chrUn (240376966-240376875) | |
| 2-111, gnl|hg17|chr2 (74506747-74506838) | |
| 2-111, gnl|Hg17|chr2 (74506862-74506753) | |
| 2-111, gnl|mm7|chr6 (83217999-83217909) | |
| 2-111, gnl|Mm7|chr6 (83217883-83217992) | |
| 2-111, gnl|monDom2|scaffold_10 (48356539-48356448) | |
| 2-111, gnl|oryCun1|scaffold_200457 (128927-128836) | |
| 2-111, gnl|panTro1|chr12 (76909599-76909690) | |
| 2-111, gnl|rheMac2|chr13 (74595892-74595983) | |
| 2-111, gnl|rn3|chr4 (117647431-117647340) | |
| 2-111, gnl|tetNig1|chr10 (11866896-11866805) | |
| 2-111, gnl|xenTro1|scaffold_778 (72873-72964) | |
| 112-280, gnl|bosTau2|chr11 (7955184-7955352) | |
| 112-280, gnl|canFam2|chr17 (51822473-51822274) | |
| 112-280, gnl|danRer3|chrUn (120223516-120223323) | |
| 112-280, gnl|dasNov1|scaffold_13624 (5292-5093) | |
| 112-280, gnl|echTel1|scaffold_310888 (78326-78525) | |
| 112-280, gnl|fr1|chrUn (240377209-240377015) | |
| 112-280, gnl|galGal2|chrUn (80545245-80545442) | |
| 112-280, gnl|hg17|chr2 (74506475-74506674) | |
| 112-280, gnl|Hg17|chr2 (74506646-74506478) | |
| 112-280, gnl|mm7|chr6 (83218279-83218079) | |
| 112-280, gnl|Mm7|chr6 (83218106-83218274) | |
| 112-280, gnl|monDom2|scaffold_10 (48356907-48356707) | |
| 112-280, gnl|oryCun1|scaffold_200457 (129200-129001) | |
| 112-280, gnl|panTro1|chr12 (76909327-76909526) | |
| 112-280, gnl|rheMac2|chr13 (74595619-74595818) | |
| 112-280, gnl|rn3|chr4 (117647686-117647487) | |
| 112-280, gnl|tetNig1|chr10 (11867134-11866933) | |
| 112-280, gnl|xenTro1|scaffold_778 (70258-70466) | |
| 411-564, gnl|bosTau2|chr11 (7956085-7956238) | |
| 411-564, gnl|canFam2|chr17 (51823342-51823193) | |
| 411-564, gnl|danRer3|chrUn (120224895-120224747) | |
| 411-564, gnl|dasNov1|scaffold_13624 (6166-6017) | |
| 411-564, gnl|echTel1|scaffold_310888 (77499-77648) | |
| 411-564, gnl|fr1|chrUn (240377636-240377487) | |
| 411-564, gnl|hg17|chr2 (74505564-74505713) | |
| 411-564, gnl|Hg17|chr2 (74505716-74505563) | |
| 411-564, gnl|loxAfr1|scaffold_130374 (4902-5051) | |
| 411-564, gnl|mm7|chr6 (83219644-83219495) | |
| 411-564, gnl|Mm7|chr6 (83219490-83219643) | |
| 411-564, gnl|monDom2|scaffold_10 (48361061-48360912) | |
| 411-564, gnl|oryCun1|scaffold_200457 (130080-129931) | |
| 411-564, gnl|panTro1|chr12 (76908416-76908565) | |
| 411-564, gnl|rheMac2|chr13 (74594708-74594857) | |
| 411-564, gnl|rn3|chr4 (117649165-117649016) | |
| 411-564, gnl|tetNig1|chr10 (11867559-11867410) | |
| 411-564, gnl|xenTro1|scaffold_778 (68720-68869) |
| Aligned organism(s): 53 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-111, gnl|bosTau2|chr11 (7954969-7955078) | |
| 2-111, gnl|canFam2|chr17 (51822201-51822110) | |
| 2-111, gnl|danRer3|chrUn (120223223-120223132) | |
| 2-111, gnl|dasNov1|scaffold_13624 (5006-4915) | |
| 2-111, gnl|echTel1|scaffold_310888 (78589-78680) | |
| 2-111, gnl|fr1|chrUn (240376966-240376875) | |
| 2-111, gnl|hg17|chr2 (74506747-74506838) | |
| 2-111, gnl|Hg17|chr2 (74506862-74506753) | |
| 2-111, gnl|mm7|chr6 (83217999-83217909) | |
| 2-111, gnl|Mm7|chr6 (83217883-83217992) | |
| 2-111, gnl|monDom2|scaffold_10 (48356539-48356448) | |
| 2-111, gnl|oryCun1|scaffold_200457 (128927-128836) | |
| 2-111, gnl|panTro1|chr12 (76909599-76909690) | |
| 2-111, gnl|rheMac2|chr13 (74595892-74595983) | |
| 2-111, gnl|rn3|chr4 (117647431-117647340) | |
| 2-111, gnl|tetNig1|chr10 (11866896-11866805) | |
| 2-111, gnl|xenTro1|scaffold_778 (72873-72964) | |
| 112-280, gnl|bosTau2|chr11 (7955184-7955352) | |
| 112-280, gnl|canFam2|chr17 (51822473-51822274) | |
| 112-280, gnl|danRer3|chrUn (120223516-120223323) | |
| 112-280, gnl|dasNov1|scaffold_13624 (5292-5093) | |
| 112-280, gnl|echTel1|scaffold_310888 (78326-78525) | |
| 112-280, gnl|fr1|chrUn (240377209-240377015) | |
| 112-280, gnl|galGal2|chrUn (80545245-80545442) | |
| 112-280, gnl|hg17|chr2 (74506475-74506674) | |
| 112-280, gnl|Hg17|chr2 (74506646-74506478) | |
| 112-280, gnl|mm7|chr6 (83218279-83218079) | |
| 112-280, gnl|Mm7|chr6 (83218106-83218274) | |
| 112-280, gnl|monDom2|scaffold_10 (48356907-48356707) | |
| 112-280, gnl|oryCun1|scaffold_200457 (129200-129001) | |
| 112-280, gnl|panTro1|chr12 (76909327-76909526) | |
| 112-280, gnl|rheMac2|chr13 (74595619-74595818) | |
| 112-280, gnl|rn3|chr4 (117647686-117647487) | |
| 112-280, gnl|tetNig1|chr10 (11867134-11866933) | |
| 112-280, gnl|xenTro1|scaffold_778 (70258-70466) | |
| 411-564, gnl|bosTau2|chr11 (7956085-7956238) | |
| 411-564, gnl|canFam2|chr17 (51823342-51823193) | |
| 411-564, gnl|danRer3|chrUn (120224895-120224747) | |
| 411-564, gnl|dasNov1|scaffold_13624 (6166-6017) | |
| 411-564, gnl|echTel1|scaffold_310888 (77499-77648) | |
| 411-564, gnl|fr1|chrUn (240377636-240377487) | |
| 411-564, gnl|hg17|chr2 (74505564-74505713) | |
| 411-564, gnl|Hg17|chr2 (74505716-74505563) | |
| 411-564, gnl|loxAfr1|scaffold_130374 (4902-5051) | |
| 411-564, gnl|mm7|chr6 (83219644-83219495) | |
| 411-564, gnl|Mm7|chr6 (83219490-83219643) | |
| 411-564, gnl|monDom2|scaffold_10 (48361061-48360912) | |
| 411-564, gnl|oryCun1|scaffold_200457 (130080-129931) | |
| 411-564, gnl|panTro1|chr12 (76908416-76908565) | |
| 411-564, gnl|rheMac2|chr13 (74594708-74594857) | |
| 411-564, gnl|rn3|chr4 (117649165-117649016) | |
| 411-564, gnl|tetNig1|chr10 (11867559-11867410) | |
| 411-564, gnl|xenTro1|scaffold_778 (68720-68869) |