Pig1-72H06
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GTAGTAATTATCTCCTATTACTTAGCGCTGATCAACAGCACCTCTCCATCTAATTGCCAA
CCTGCTCTAATCACTGAGACTATTCTTGCTTTAGCCAGAGACGGAAGGACCAACTTTTAT
AAATATTGCTTTATTGTCCTTATTCCATTAAACAATCAGGGACTGTGGCCCTGCCCTTGC
TGTCAAATGCCTCTAGCGCACACGGTTTCTGGATTGTTTAATGAATCTGCACATTTTCTT
GCAGGTAAGTGACAGCCCCTGTTCTAGTCGGTCTAGCTGGACTTGCCCTTGTCTGTTCGT
GCACCTCGGTGGCTATCTGCAGCTTGTAAATCGTGTAAAGTCAAGAGAAGAATGTATACA
CATATGTGTGTTGAATAAATAATTACCATTGGCATAGGTATGTGTATACACATGGCACAC
CAACCTACAGCGTATATAGCAAAGAATCAGGGAGGCTAAAAATATTGCCCCATATGTTCC
CCCATTAGCATAGGATGGGGAAGCCTTACTCACTTGAATGGG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GTAGTAATTATCTCCTATTACTTAGCGCTGATCAACAGCACCTCTCCATCTAATTGCCAA
CCTGCTCTAATCACTGAGACTATTCTTGCTTTAGCCAGAGACGGAAGGACCAACTTTTAT
AAATATTGCTTTATTGTCCTTATTCCATTAAACAATCAGGGACTGTGGCCCTGCCCTTGC
TGTCAAATGCCTCTAGCGCACACGGTTTCTGGATTGTTTAATGAATCTGCACATTTTCTT
GCAGGTAAGTGACAGCCCCTGTTCTAGTCGGTCTAGCTGGACTTGCCCTTGTCTGTTCGT
GCACCTCGGTGGCTATCTGCAGCTTGTAAATCGTGTAAAGTCAAGAGAAGAATGTATACA
CATATGTGTGTTGAATAAATAATTACCATTGGCATAGGTATGTGTATACACATGGCACAC
CAACCTACAGCGTATATAGCAAAGAATCAGGGAGGCTAAAAATATTGCCCCATATGTTCC
CCCATTAGCATAGGATGGGGAAGCCTTACTCACTTGAATGGG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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366-424, + strand, RNAmicro p=0.951456 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
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366-424, + strand, RNAmicro p=0.951456 |
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308-465, BX103236 Soares_multiple_sclerosis_2NbHMSP Homo sapiens cDNA clone
(emb|BX103236.1|), blast E-value=2e-40, identity=89.94% |
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308-465, CR736089 Soares_multiple_sclerosis_2NbHMSP Homo sapiens cDNA clone
(emb|CR736089.1|), blast E-value=1.96182e-44, identity=90.51% |
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308-465, fs30f06.y1 Human Lens cDNA (Normalized) (gb|CD675982.1|), blast
E-value=3.99931e-42, identity=89.87% |
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308-464, BovGen_16672 normal cattle brain Bos taurus cDNA clone
(gb|CO888347.1|), blast E-value=0, identity=92.36% |
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308-464, 1438373 MARC 7BOV Bos taurus cDNA 5', mRNA sequence (gb|DT885123.1|),
blast E-value=0, identity=92.36% |
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308-465, yy89b09.r1 Soares_multiple_sclerosis_2NbHMSP Homo sapiens cDNA
(gb|N47442.1|), blast E-value=1.96182e-44, identity=90.51% |
PigEST conread start position and end position of sequence similarity to another annotated EST (NCBI dbEST),
transcript identifier and annotation,
blast E-value,
PigEST conread identity to the similar transcript
|
308-465, BX103236 Soares_multiple_sclerosis_2NbHMSP Homo sapiens cDNA clone
(emb|BX103236.1|), blast E-value=2e-40, identity=89.94% |
|
308-465, CR736089 Soares_multiple_sclerosis_2NbHMSP Homo sapiens cDNA clone
(emb|CR736089.1|), blast E-value=1.96182e-44, identity=90.51% |
|
308-465, fs30f06.y1 Human Lens cDNA (Normalized) (gb|CD675982.1|), blast
E-value=3.99931e-42, identity=89.87% |
|
308-464, BovGen_16672 normal cattle brain Bos taurus cDNA clone
(gb|CO888347.1|), blast E-value=0, identity=92.36% |
|
308-464, 1438373 MARC 7BOV Bos taurus cDNA 5', mRNA sequence (gb|DT885123.1|),
blast E-value=0, identity=92.36% |
|
308-465, yy89b09.r1 Soares_multiple_sclerosis_2NbHMSP Homo sapiens cDNA
(gb|N47442.1|), blast E-value=1.96182e-44, identity=90.51% |
Human gene identifier and UTR site,
human gene reading direction
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
