Non-Coding RNA Search

Pig1-73B09

Sequence:


               
               GTCTGCATCCATTTTTCAATGAAACCTGCGGGGCACCAGGCCTCTGGACTCCTGGGGTGG
CTGGAACAACAGCAGCGTCAGCACACAGACCAGGAAGGCTGCCCAGCCAGCAAGCAGTGC
CAGGCCAAGCACACCCTCTTTCCCTGACTTAGAAAAACAAAACCAATAGGCAAATCCACT
CATCAGCAGTTCTGAAGCCAGCTGTTAACCAATCCTCTTCCTGCCCTTTACTCTTTCTTT
TCTTCCTTTTTCCAGAAAAACCTGGAAAGCACTGCAAAACTTTTGCAAAACCACTTACTA
GCTCTGGCTGCCTTGTTGTTTTCCTTCTCTCCTTTGGCCTGTGTCATCCTCTCAGGCAAG
GGCCGCAGTCTGACTTCCTGCCAGCTTGCCTGCTGGGTTCATCTCGGTGTCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCTGCATCCATTTTTCAATGAAACCTGCGGGGCACCAGGCCTCTGGACTCCTGGGGTGG
CTGGAACAACAGCAGCGTCAGCACACAGACCAGGAAGGCTGCCCAGCCAGCAAGCAGTGC
CAGGCCAAGCACACCCTCTTTCCCTGACTTAGAAAAACAAAACCAATAGGCAAATCCACT
CATCAGCAGTTCTGAAGCCAGCTGTTAACCAATCCTCTTCCTGCCCTTTACTCTTTCTTT
TCTTCCTTTTTCCAGAAAAACCTGGAAAGCACTGCAAAACTTTTGCAAAACCACTTACTA
GCTCTGGCTGCCTTGTTGTTTTCCTTCTCTCCTTTGGCCTGTGTCATCCTCTCAGGCAAG
GGCCGCAGTCTGACTTCCTGCCAGCTTGCCTGCTGGGTTCATCTCGGTGTCTT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               154-313, + strand, RNAz p=0.945323

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               154-313, + strand, RNAz p=0.945323

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-413, gnl|bosTau2|chr11 (49434469-49434875)
               

               
               1-413, gnl|Hg17|chr2 (70271079-70271486)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-413, gnl|bosTau2|chr11 (49434469-49434875)
               

               
               1-413, gnl|Hg17|chr2 (70271079-70271486)

	1-413, gnl\|bosTau2\|chr11 (49434469-49434875)
	1-413, gnl\|Hg17\|chr2 (70271079-70271486)