Non-Coding RNA Search

Pig1-73M19

Sequence:


               
               GACTGGCCTCTGGCATGGTTTTTGTCCATCTCACCCACGGGCTGTGACCTTTCCTCCTCC
TCCCTCCAATGGCTTGTTCTCCCCTCCCTGGAGCTGGGCTCTCTGGGGCTTGGGCCTTCC
TTCCTCACCTGGTAGTTTGAGGATAGCCAGGCCCCCCAAACAAGGCTTGAATAACTCCCC
ACCCGTGAAAGAATTCAAGGAGAGCCTTGCAGCCGATGCCTTCCGGTGCCGCAGCATCAG
TGTTTCAGAGCACGCGGTCCGCAGGATCCAGACATCGCTCACGAGCGCCAGCTTGGGGTC
TGCAGATGAGAACTCGATGGCCCAGGCTGACGACAGCCTGAAGAACCTGCACCTGGAGCT
CACAGAAACCTGTCTAGACATGATGGCCAGATACGTGTTCTCCAACTTCACGGCCGTGCC
CAAGAGGTCTCCCGTCGGGGAGTTCCTTCTGGCTGGTGGCAGGACCAAAACCTGGCTGGT
TGGGAACAAGCTGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACTGGCCTCTGGCATGGTTTTTGTCCATCTCACCCACGGGCTGTGACCTTTCCTCCTCC
TCCCTCCAATGGCTTGTTCTCCCCTCCCTGGAGCTGGGCTCTCTGGGGCTTGGGCCTTCC
TTCCTCACCTGGTAGTTTGAGGATAGCCAGGCCCCCCAAACAAGGCTTGAATAACTCCCC
ACCCGTGAAAGAATTCAAGGAGAGCCTTGCAGCCGATGCCTTCCGGTGCCGCAGCATCAG
TGTTTCAGAGCACGCGGTCCGCAGGATCCAGACATCGCTCACGAGCGCCAGCTTGGGGTC
TGCAGATGAGAACTCGATGGCCCAGGCTGACGACAGCCTGAAGAACCTGCACCTGGAGCT
CACAGAAACCTGTCTAGACATGATGGCCAGATACGTGTTCTCCAACTTCACGGCCGTGCC
CAAGAGGTCTCCCGTCGGGGAGTTCCTTCTGGCTGGTGGCAGGACCAAAACCTGGCTGGT
TGGGAACAAGCTGGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               62-220, - strand, RNAz p=0.633506

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               62-220, - strand, RNAz p=0.633506

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               25-265, gnl|bosTau2|chr25 (2798535-2798776)
               

               
               25-265, gnl|Hg17|chr16 (2067486-2067729)
               

               
               25-265, gnl|Mm7|chr17 (22787291-22787048)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               25-265, gnl|bosTau2|chr25 (2798535-2798776)
               

               
               25-265, gnl|Hg17|chr16 (2067486-2067729)
               

               
               25-265, gnl|Mm7|chr17 (22787291-22787048)

	25-265, gnl\|bosTau2\|chr25 (2798535-2798776)
	25-265, gnl\|Hg17\|chr16 (2067486-2067729)
	25-265, gnl\|Mm7\|chr17 (22787291-22787048)