Non-Coding RNA Search

Pig1-74B05

Sequence:


               
               CTTGTGATTGGAAACCGTGAAGAATCAGCTGCTGGCTGTTGGCTATTTAACTTCTAGCTG
ATTCATTTGTTGTCAAAAGCAGTTTCCTGTCTGGTGGGGGAGGGAAAGAAAGCAAATAGG
AAGTGAAGTAGGGAAACCAGCTGTTTGTTAAATATTAGTAAATGAGTGTTACATTTTGAT
TTTTTTAAATTGGGTGAAACATTAATCTTTTTACTTTTGTCTCTAAATCTCATAGAGCCT
CCTTTTTCTGTTTTGGGTTTTGTTTTGTTTTTTTTAATCTTAATTATACAAGAGTTTTCA
AATTCTTAATATAATTTTGTACAAAAATATAATCCTAGAGAATGAACTTCAGGTGAACTA
AGGGGAGCAGCCAATATGAACAAATTCATTTAAATTGATAATTTAGTGTTTCATGGGCTT
TTTACAGTATGTACTTAAAATACTAAAACTTTGAACTTACTGTTGAATCTGCTGCCTGAT
AATAAATTAACTCATGGAATAATTCTGTGGTACATTTTGAAAATGAAAAAACAGAAGTCT
AAATAAATATCTACATTCAAAAGGATTGCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTGTGATTGGAAACCGTGAAGAATCAGCTGCTGGCTGTTGGCTATTTAACTTCTAGCTG
ATTCATTTGTTGTCAAAAGCAGTTTCCTGTCTGGTGGGGGAGGGAAAGAAAGCAAATAGG
AAGTGAAGTAGGGAAACCAGCTGTTTGTTAAATATTAGTAAATGAGTGTTACATTTTGAT
TTTTTTAAATTGGGTGAAACATTAATCTTTTTACTTTTGTCTCTAAATCTCATAGAGCCT
CCTTTTTCTGTTTTGGGTTTTGTTTTGTTTTTTTTAATCTTAATTATACAAGAGTTTTCA
AATTCTTAATATAATTTTGTACAAAAATATAATCCTAGAGAATGAACTTCAGGTGAACTA
AGGGGAGCAGCCAATATGAACAAATTCATTTAAATTGATAATTTAGTGTTTCATGGGCTT
TTTACAGTATGTACTTAAAATACTAAAACTTTGAACTTACTGTTGAATCTGCTGCCTGAT
AATAAATTAACTCATGGAATAATTCTGTGGTACATTTTGAAAATGAAAAAACAGAAGTCT
AAATAAATATCTACATTCAAAAGGATTGCAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-157, + strand, RNAz p=0.809554

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-157, + strand, RNAz p=0.809554

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-568, gnl|bosTau2|chr16 (13807978-13808532)
               

               
               1-568, gnl|Hg17|chr1 (220925196-220924638)
               

               
               1-568, gnl|Mm7|chr1 (181187935-181187387)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-568, gnl|bosTau2|chr16 (13807978-13808532)
               

               
               1-568, gnl|Hg17|chr1 (220925196-220924638)
               

               
               1-568, gnl|Mm7|chr1 (181187935-181187387)

	1-568, gnl\|bosTau2\|chr16 (13807978-13808532)
	1-568, gnl\|Hg17\|chr1 (220925196-220924638)
	1-568, gnl\|Mm7\|chr1 (181187935-181187387)