Non-Coding RNA Search

Pig1-76D01

Sequence:


               
               ACCTGTTACTCAAATGTGCAACAACCCCATCTACAAGCCTCGTGAGGAGGAGGAGGTGGC
TGTTTCATCAATTCAGGAGGTGGGGAGTGCANAATGCGGGGCTCCTGGAACACAACCCCA
TGGAATGGGGGAGGTTCTCCTAGGAAGTGAGCAGTTTGCTGAGACACCCAAGGAGAACCA
TAGCAACTACCGGACCTTGCTAGAAAAAGAAAAGGAGTGGGCCCTGGCAGTGTCCANTTC
TCAGCTCAATACCATAGTGACCATGAATCATCATCACCCTCACCCTCACCACCCAACAAT
TGGGGTTTCAGGGGTAGTTGCGGGAACTGGGGGAGACTTGGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCTGTTACTCAAATGTGCAACAACCCCATCTACAAGCCTCGTGAGGAGGAGGAGGTGGC
TGTTTCATCAATTCAGGAGGTGGGGAGTGCANAATGCGGGGCTCCTGGAACACAACCCCA
TGGAATGGGGGAGGTTCTCCTAGGAAGTGAGCAGTTTGCTGAGACACCCAAGGAGAACCA
TAGCAACTACCGGACCTTGCTAGAAAAAGAAAAGGAGTGGGCCCTGGCAGTGTCCANTTC
TCAGCTCAATACCATAGTGACCATGAATCATCATCACCCTCACCCTCACCACCCAACAAT
TGGGGTTTCAGGGGTAGTTGCGGGAACTGGGGGAGACTTGGCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               82-241, + strand, RNAz p=0.947075

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               82-241, + strand, RNAz p=0.947075

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               2-341, gnl|bosTau2|chr1 (68290497-68290155)
               

               
               2-341, gnl|Hg17|chr3 (166389085-166388749)
               

               
               2-341, gnl|Mm7|chr3 (73148850-73148508)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-341, gnl|bosTau2|chr1 (68290497-68290155)
               

               
               2-341, gnl|Hg17|chr3 (166389085-166388749)
               

               
               2-341, gnl|Mm7|chr3 (73148850-73148508)

	2-341, gnl\|bosTau2\|chr1 (68290497-68290155)
	2-341, gnl\|Hg17\|chr3 (166389085-166388749)
	2-341, gnl\|Mm7\|chr3 (73148850-73148508)