Non-Coding RNA Search

Pig1-7C05

Sequence:


               
               GCTGTTACATCATGTGGAATCCTTTCTCCTAGCCATTAGCTTTTACAGTGTGGTCTTGAT
GGCAAAGCCCCCTGGTGCCAAGCCCAGGAAAGGGCCAGCTCATGGGGAGGCATGTGTTCC
AGAAACTGCTGTCTGTGCTCCTTTAGATACGGAGACTACCATGTGCCTACTCACTGTGGT
GTCCAACTGCTCCCAGCTCAGCACTTAGCTTTCCAGACTCTCTGCTCTGGGCCTGTCGCC
AATCCTTCTTTAGCAGAGACTGTTAGCCCGTGCCGGGGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGTTACATCATGTGGAATCCTTTCTCCTAGCCATTAGCTTTTACAGTGTGGTCTTGAT
GGCAAAGCCCCCTGGTGCCAAGCCCAGGAAAGGGCCAGCTCATGGGGAGGCATGTGTTCC
AGAAACTGCTGTCTGTGCTCCTTTAGATACGGAGACTACCATGTGCCTACTCACTGTGGT
GTCCAACTGCTCCCAGCTCAGCACTTAGCTTTCCAGACTCTCTGCTCTGGGCCTGTCGCC
AATCCTTCTTTAGCAGAGACTGTTAGCCCGTGCCGGGGTC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               160-280, - strand, RNAz p=0.51206

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               160-280, - strand, RNAz p=0.51206

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

Help | Less info


               
               2-280, gnl|bosTau2|chr2 (83621098-83621364)
               

               
               2-280, gnl|canFam2|chr2 (84355359-84354911)
               

               
               2-280, gnl|dasNov1|scaffold_31011 (5031-5436)
               

               
               2-280, gnl|hg17|chr1 (16320334-16320780)
               

               
               2-280, gnl|Hg17|chr1 (16320753-16320487)
               

               
               2-280, gnl|loxAfr1|scaffold_19793 (8960-9409)
               

               
               2-280, gnl|mm7|chr4 (140580991-140580613)
               

               
               2-280, gnl|Mm7|chr4 (140580633-140580861)
               

               
               2-280, gnl|monDom2|scaffold_109 (2757397-2756953)
               

               
               2-280, gnl|oryCun1|scaffold_200656 (45039-44631)
               

               
               2-280, gnl|panTro1|chr1 (16485705-16486151)
               

               
               2-280, gnl|rheMac2|chr1 (19052296-19052739)
               

               
               2-280, gnl|rn3|chr5 (160073652-160073235)

Aligned organism(s): 13 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-280, gnl|bosTau2|chr2 (83621098-83621364)
               

               
               2-280, gnl|canFam2|chr2 (84355359-84354911)
               

               
               2-280, gnl|dasNov1|scaffold_31011 (5031-5436)
               

               
               2-280, gnl|hg17|chr1 (16320334-16320780)
               

               
               2-280, gnl|Hg17|chr1 (16320753-16320487)
               

               
               2-280, gnl|loxAfr1|scaffold_19793 (8960-9409)
               

               
               2-280, gnl|mm7|chr4 (140580991-140580613)
               

               
               2-280, gnl|Mm7|chr4 (140580633-140580861)
               

               
               2-280, gnl|monDom2|scaffold_109 (2757397-2756953)
               

               
               2-280, gnl|oryCun1|scaffold_200656 (45039-44631)
               

               
               2-280, gnl|panTro1|chr1 (16485705-16486151)
               

               
               2-280, gnl|rheMac2|chr1 (19052296-19052739)
               

               
               2-280, gnl|rn3|chr5 (160073652-160073235)

	2-280, gnl\|bosTau2\|chr2 (83621098-83621364)
	2-280, gnl\|canFam2\|chr2 (84355359-84354911)
	2-280, gnl\|dasNov1\|scaffold_31011 (5031-5436)
	2-280, gnl\|hg17\|chr1 (16320334-16320780)
	2-280, gnl\|Hg17\|chr1 (16320753-16320487)
	2-280, gnl\|loxAfr1\|scaffold_19793 (8960-9409)
	2-280, gnl\|mm7\|chr4 (140580991-140580613)
	2-280, gnl\|Mm7\|chr4 (140580633-140580861)
	2-280, gnl\|monDom2\|scaffold_109 (2757397-2756953)
	2-280, gnl\|oryCun1\|scaffold_200656 (45039-44631)
	2-280, gnl\|panTro1\|chr1 (16485705-16486151)
	2-280, gnl\|rheMac2\|chr1 (19052296-19052739)
	2-280, gnl\|rn3\|chr5 (160073652-160073235)