Pig1-80I18
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GGTGGAAGCCCATGACCGAGCTCTATGCTGTGCCCTACGCGCTGCCTGAGGATGAGGACA
CCACGGATAGTGAACACCTGAGCCAGGCAGAGTGGTGGGAGCTCCTCTTCTTCATCAAGA
AGCTGGATGGACCTGACCATCGGGAGGTTCTCCAGATCCTGCAGGAGAACCTGGATGAGG
AGATTCTGGATGATGACATCCTGGCTGAGCTGGCCGTGCCCACGGAGTTGGCCCAGGAAC
TGCTGCTGGCTCTGCCACAGCGACTCGATGACAGCGCTCTCAGAGACCTGCTCAGCTGCC
GTGTCTACAGGAAGTACGGGCCCGAGACCCTGGCTGGGCAGTCGGTCTACCCATCCGTGC
TGGAAGCCCAGGCCCAGCCTCAGAAATCGGCAGTTGCAGCCAGAGTGGAAGCAAAAGAAG
CCTCAACTCAGTGCCATCACACTTCCCTGCAGAGTCTGGTGGAGGGTTATGGTCCTGCTG
GGAAGATCTTCCTGGATCTGGAGCGAGCCCTCCGCTCA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GGTGGAAGCCCATGACCGAGCTCTATGCTGTGCCCTACGCGCTGCCTGAGGATGAGGACA
CCACGGATAGTGAACACCTGAGCCAGGCAGAGTGGTGGGAGCTCCTCTTCTTCATCAAGA
AGCTGGATGGACCTGACCATCGGGAGGTTCTCCAGATCCTGCAGGAGAACCTGGATGAGG
AGATTCTGGATGATGACATCCTGGCTGAGCTGGCCGTGCCCACGGAGTTGGCCCAGGAAC
TGCTGCTGGCTCTGCCACAGCGACTCGATGACAGCGCTCTCAGAGACCTGCTCAGCTGCC
GTGTCTACAGGAAGTACGGGCCCGAGACCCTGGCTGGGCAGTCGGTCTACCCATCCGTGC
TGGAAGCCCAGGCCCAGCCTCAGAAATCGGCAGTTGCAGCCAGAGTGGAAGCAAAAGAAG
CCTCAACTCAGTGCCATCACACTTCCCTGCAGAGTCTGGTGGAGGGTTATGGTCCTGCTG
GGAAGATCTTCCTGGATCTGGAGCGAGCCCTCCGCTCA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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10-89, - strand, RNAmicro p=0.969674 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
10-89, - strand, RNAmicro p=0.969674 |
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3-182, gnl|bosTau2|chr23 (13090198-13090019) |
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3-182, gnl|canFam2|chr12 (14573754-14573933) |
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3-182, gnl|danRer3|chr22 (35938974-35939147) |
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3-182, gnl|dasNov1|scaffold_4558 (15047-15226) |
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3-182, gnl|fr1|chrUn (139367471-139367312) |
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3-182, gnl|galGal2|chr3 (4266644-4266471) |
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3-182, gnl|hg17|chr6 (43125677-43125856) |
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3-182, gnl|Hg17|chr6 (43125858-43125679) |
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3-182, gnl|mm7|chr17 (44782918-44782739) |
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3-182, gnl|Mm7|chr17 (44782735-44782914) |
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3-182, gnl|monDom2|scaffold_0 (198596839-198596660) |
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3-182, gnl|oryCun1|scaffold_173098 (40991-41169) |
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3-182, gnl|panTro1|chr5 (43723955-43724134) |
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3-182, gnl|rheMac2|chr4 (42938936-42939115) |
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3-182, gnl|rn3|chr9 (10021465-10021286) |
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3-182, gnl|tetNig1|chr17 (7783054-7782895) |
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3-182, gnl|xenTro1|scaffold_1226 (176265-176438) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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3-182, gnl|bosTau2|chr23 (13090198-13090019) |
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3-182, gnl|canFam2|chr12 (14573754-14573933) |
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3-182, gnl|danRer3|chr22 (35938974-35939147) |
|
3-182, gnl|dasNov1|scaffold_4558 (15047-15226) |
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3-182, gnl|fr1|chrUn (139367471-139367312) |
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3-182, gnl|galGal2|chr3 (4266644-4266471) |
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3-182, gnl|hg17|chr6 (43125677-43125856) |
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3-182, gnl|Hg17|chr6 (43125858-43125679) |
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3-182, gnl|mm7|chr17 (44782918-44782739) |
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3-182, gnl|Mm7|chr17 (44782735-44782914) |
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3-182, gnl|monDom2|scaffold_0 (198596839-198596660) |
|
3-182, gnl|oryCun1|scaffold_173098 (40991-41169) |
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3-182, gnl|panTro1|chr5 (43723955-43724134) |
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3-182, gnl|rheMac2|chr4 (42938936-42939115) |
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3-182, gnl|rn3|chr9 (10021465-10021286) |
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3-182, gnl|tetNig1|chr17 (7783054-7782895) |
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3-182, gnl|xenTro1|scaffold_1226 (176265-176438) |
