Pig1-82B06
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAATAGCCCAGCTCTTCCAGCCCAGGAGGGCCAGTCCCTGCGCCTGCTCTGTGCTGCCGA CAGCAACCCTCCTGCCCTGATAAGCTGGTTCCGGGGGAGCCTGCCTCTGAGCCCTTCAAA TTCCTTCAACTCCGGGGTCCTGGACCTGCCCCGGGTAGAACTCGGGGATCATGGGAAATA CACCTGCCGAGTTCACCACCCACTGGGCTCCAGGGAAAGCTCCCTGACCCTCCTGGTGAA AAAACCCCCGCAGCTACTGGGTCCCTCCTGCTCCTGGGAGGATGAGAGTCTGCACTGCTG CTGCTCTGCTCAATCCCAGCTGGTCCCGTCCCTGCGCTGGCGGCTGCGGGAGGAGCTGCT GGACGGCAACCTCAGCAACGCCTCCTTCAAGATCACCTCCAGCTCCGCCGGGCCCTGGGC CAACAGCTCCTTGAGCCTCCACGAGGGTCTGGGCTCCAACCTCAGGCTCAGCTGCGAGGC CCAAAATGCCCACGGGAAACAGAGCGGGACGATTCTGCTGCTGCCAACTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAATAGCCCAGCTCTTCCAGCCCAGGAGGGCCAGTCCCTGCGCCTGCTCTGTGCTGCCGA CAGCAACCCTCCTGCCCTGATAAGCTGGTTCCGGGGGAGCCTGCCTCTGAGCCCTTCAAA TTCCTTCAACTCCGGGGTCCTGGACCTGCCCCGGGTAGAACTCGGGGATCATGGGAAATA CACCTGCCGAGTTCACCACCCACTGGGCTCCAGGGAAAGCTCCCTGACCCTCCTGGTGAA AAAACCCCCGCAGCTACTGGGTCCCTCCTGCTCCTGGGAGGATGAGAGTCTGCACTGCTG CTGCTCTGCTCAATCCCAGCTGGTCCCGTCCCTGCGCTGGCGGCTGCGGGAGGAGCTGCT GGACGGCAACCTCAGCAACGCCTCCTTCAAGATCACCTCCAGCTCCGCCGGGCCCTGGGC CAACAGCTCCTTGAGCCTCCACGAGGGTCTGGGCTCCAACCTCAGGCTCAGCTGCGAGGC CCAAAATGCCCACGGGAAACAGAGCGGGACGATTCTGCTGCTGCCAACTC |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 318-411, + strand, RNAz p=0.982057 | |
| 404-526, - strand, RNAz p=0.954202 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 318-411, + strand, RNAz p=0.982057 | |
| 404-526, - strand, RNAz p=0.954202 |
| Predicted microRNA(s): 2 entry(ies) | More info |
| Predicted microRNA(s): 2 entry(ies) | Help | Less info |
| 402-505, + strand, RNAmicro p=0.986721 | |
| 308-435, - strand, RNAmicro p=0.902563 |
| Predicted microRNA(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 402-505, + strand, RNAmicro p=0.986721 | |
| 308-435, - strand, RNAmicro p=0.902563 |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 1-242, gnl|bosTau2|chr18 (52399342-52399583) | |
| 1-242, gnl|canFam2|chr1 (108588618-108588836) | |
| 1-242, gnl|dasNov1|scaffold_29321 (10924-10711) | |
| 1-242, gnl|echTel1|scaffold_212955 (3318-3536) | |
| 1-242, gnl|hg17|chr19 (56650492-56650710) | |
| 1-242, gnl|Hg17|chr19 (56381361-56381602) | |
| 1-242, gnl|loxAfr1|scaffold_26917 (42392-42174) | |
| 1-242, gnl|mm7|chr7 (39833226-39833444) | |
| 1-242, gnl|Mm7|chr7 (39530562-39530797) | |
| 1-242, gnl|monDom2|scaffold_212 (172289-172066) | |
| 1-242, gnl|oryCun1|scaffold_102686 (3180-2962) | |
| 1-242, gnl|panTro1|chr20 (54077335-54077553) | |
| 1-242, gnl|rheMac2|chr19 (57308024-57307806) | |
| 1-242, gnl|rn3|chr1 (94146811-94147029) | |
| 245-526, gnl|bosTau2|chr18 (50889240-50888959) | |
| 245-526, gnl|canFam2|chr1 (108341563-108341256) | |
| 245-526, gnl|dasNov1|scaffold_64092 (4892-5178) | |
| 245-526, gnl|echTel1|scaffold_183081 (5958-5656) | |
| 245-526, gnl|hg17|chr19 (56822499-56822810) | |
| 245-526, gnl|Hg17|chr19 (56822809-56822528) | |
| 245-526, gnl|loxAfr1|scaffold_32291 (454-764) | |
| 245-526, gnl|mm7|chr7 (39531206-39530900) | |
| 245-526, gnl|Mm7|chr7 (39587462-39587743) | |
| 245-526, gnl|monDom2|scaffold_212 (115642-115333) | |
| 245-526, gnl|oryCun1|scaffold_61800 (1629-1947) | |
| 245-526, gnl|panTro1|chr20 (54250537-54250848) | |
| 245-526, gnl|rheMac2|chr19 (57686723-57687034) | |
| 245-526, gnl|rn3|chr1 (93817565-93817259) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-242, gnl|bosTau2|chr18 (52399342-52399583) | |
| 1-242, gnl|canFam2|chr1 (108588618-108588836) | |
| 1-242, gnl|dasNov1|scaffold_29321 (10924-10711) | |
| 1-242, gnl|echTel1|scaffold_212955 (3318-3536) | |
| 1-242, gnl|hg17|chr19 (56650492-56650710) | |
| 1-242, gnl|Hg17|chr19 (56381361-56381602) | |
| 1-242, gnl|loxAfr1|scaffold_26917 (42392-42174) | |
| 1-242, gnl|mm7|chr7 (39833226-39833444) | |
| 1-242, gnl|Mm7|chr7 (39530562-39530797) | |
| 1-242, gnl|monDom2|scaffold_212 (172289-172066) | |
| 1-242, gnl|oryCun1|scaffold_102686 (3180-2962) | |
| 1-242, gnl|panTro1|chr20 (54077335-54077553) | |
| 1-242, gnl|rheMac2|chr19 (57308024-57307806) | |
| 1-242, gnl|rn3|chr1 (94146811-94147029) | |
| 245-526, gnl|bosTau2|chr18 (50889240-50888959) | |
| 245-526, gnl|canFam2|chr1 (108341563-108341256) | |
| 245-526, gnl|dasNov1|scaffold_64092 (4892-5178) | |
| 245-526, gnl|echTel1|scaffold_183081 (5958-5656) | |
| 245-526, gnl|hg17|chr19 (56822499-56822810) | |
| 245-526, gnl|Hg17|chr19 (56822809-56822528) | |
| 245-526, gnl|loxAfr1|scaffold_32291 (454-764) | |
| 245-526, gnl|mm7|chr7 (39531206-39530900) | |
| 245-526, gnl|Mm7|chr7 (39587462-39587743) | |
| 245-526, gnl|monDom2|scaffold_212 (115642-115333) | |
| 245-526, gnl|oryCun1|scaffold_61800 (1629-1947) | |
| 245-526, gnl|panTro1|chr20 (54250537-54250848) | |
| 245-526, gnl|rheMac2|chr19 (57686723-57687034) | |
| 245-526, gnl|rn3|chr1 (93817565-93817259) |