Non-Coding RNA Search

Pig1-82C01

Sequence:


               
               AGCAAGTTGGAATGTACCTCTGTTTCCAGTGTGCCTCCAGTCTTCCACTTTAGCCCACAG
CACTGTGCACACCTCAAGAACCAGTATGTGAAAAAAGCTGCTGCAAACCTCACCTTTTCT
CAGGAGGTGGTGTGGCTGCGAGCGCTGCCCAGCATTCCTTACAGCCAGTACAGCTTTGAC
CATCTCTACAATGCAGACGAACATCATCCAGCCTTGCAAGGTCAGGAAGGCCCGACCTGA
GAAACCTGCCAGCCTCAAGTTCTTGGATTTTTCAGGTCCCTCAACAAAGGTCACCTCCCA
GGCTATGAAGACGGAAAGCTCTGCCAATCTAAAGAAGCTGAAGAAATCAAAGCCAACAAG
TGCAGTCCAGGAAGCACCTGGCCCTCTCATTCTTCATCCCCGCAGGAACCCAGACATGGA
TCTGTCACTTTCTCCAGATGTGAACCTGGAGGAGAGGGAAACCTGGCTTCCACCTGCTGA
AAAAGAGGCCAGAGCCTGGGAGGCTATCGTGCTGGAAAAGCTTAACAAGCGCACTGCCCG
ATGGATCCAGAGCAAGCGTCCTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCAAGTTGGAATGTACCTCTGTTTCCAGTGTGCCTCCAGTCTTCCACTTTAGCCCACAG
CACTGTGCACACCTCAAGAACCAGTATGTGAAAAAAGCTGCTGCAAACCTCACCTTTTCT
CAGGAGGTGGTGTGGCTGCGAGCGCTGCCCAGCATTCCTTACAGCCAGTACAGCTTTGAC
CATCTCTACAATGCAGACGAACATCATCCAGCCTTGCAAGGTCAGGAAGGCCCGACCTGA
GAAACCTGCCAGCCTCAAGTTCTTGGATTTTTCAGGTCCCTCAACAAAGGTCACCTCCCA
GGCTATGAAGACGGAAAGCTCTGCCAATCTAAAGAAGCTGAAGAAATCAAAGCCAACAAG
TGCAGTCCAGGAAGCACCTGGCCCTCTCATTCTTCATCCCCGCAGGAACCCAGACATGGA
TCTGTCACTTTCTCCAGATGTGAACCTGGAGGAGAGGGAAACCTGGCTTCCACCTGCTGA
AAAAGAGGCCAGAGCCTGGGAGGCTATCGTGCTGGAAAAGCTTAACAAGCGCACTGCCCG
ATGGATCCAGAGCAAGCGTCCTCTG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               364-563, + strand, RNAz p=0.999824

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               364-563, + strand, RNAz p=0.999824

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of NM_203309, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_203309, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               9-563, gnl|bosTau2|chr10 (60124708-60124149)
               

               
               9-563, gnl|Hg17|chr14 (73059496-73058940)
               

               
               9-563, gnl|Mm7|chr12 (81976408-81975810)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-563, gnl|bosTau2|chr10 (60124708-60124149)
               

               
               9-563, gnl|Hg17|chr14 (73059496-73058940)
               

               
               9-563, gnl|Mm7|chr12 (81976408-81975810)

	9-563, gnl\|bosTau2\|chr10 (60124708-60124149)
	9-563, gnl\|Hg17\|chr14 (73059496-73058940)
	9-563, gnl\|Mm7\|chr12 (81976408-81975810)