Non-Coding RNA Search

Pig1-82C15

Sequence:


               
               CGGACGCGTGGGGGCAGCCGCGNGATTAGGCTTCGCTTGCCACAATTGCGGGACAAAGAT
GGCCAGACTGCTTGTGGCAGTGAGCGCCCCTCAGTGCTCCTGGGGCTGAGGCTAGGCTGG
CCGCCATGGAGCTGGGTGGGCCCTGGGCCTGGCTGCTGGGCCTGCCCACAGCCGTGGTCT
ATGGCTCCCTGGCCCTCTTCGTCTCCGTCCTGCACAACGTGTTCCTGCTTTACTATGTGG
ACACCTTTGTCTCAGTATACAAGATCAACAAAGCTGCCTTCTGGGTGGGAGAGACGGTGT
TTCTCCTCTGGAACAGCCTCAACGACCCCCTCTTCGGCTGGCTGAGTGACCGTCAGTTCC
TCAGCTCCCAGCCCTGGTCAGGTGCTGGGCTCTCCTCGAGGGCTGTGGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGACGCGTGGGGGCAGCCGCGNGATTAGGCTTCGCTTGCCACAATTGCGGGACAAAGAT
GGCCAGACTGCTTGTGGCAGTGAGCGCCCCTCAGTGCTCCTGGGGCTGAGGCTAGGCTGG
CCGCCATGGAGCTGGGTGGGCCCTGGGCCTGGCTGCTGGGCCTGCCCACAGCCGTGGTCT
ATGGCTCCCTGGCCCTCTTCGTCTCCGTCCTGCACAACGTGTTCCTGCTTTACTATGTGG
ACACCTTTGTCTCAGTATACAAGATCAACAAAGCTGCCTTCTGGGTGGGAGAGACGGTGT
TTCTCCTCTGGAACAGCCTCAACGACCCCCTCTTCGGCTGGCTGAGTGACCGTCAGTTCC
TCAGCTCCCAGCCCTGGTCAGGTGCTGGGCTCTCCTCGAGGGCTGTGGTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q6UWF4_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q6UWF4_HUMAN

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               50-248, + strand, RNAz p=0.879514

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               50-248, + strand, RNAz p=0.879514

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               120-213, + strand, RNAmicro p=0.99512

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               120-213, + strand, RNAmicro p=0.99512

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of AY358808, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of AY358808, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               50-293, gnl|bosTau2|chr26 (14068635-14068392)
               

               
               50-293, gnl|Hg17|chr10 (104218701-104218944)
               

               
               50-293, gnl|Mm7|chr19 (46262944-46263187)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               50-293, gnl|bosTau2|chr26 (14068635-14068392)
               

               
               50-293, gnl|Hg17|chr10 (104218701-104218944)
               

               
               50-293, gnl|Mm7|chr19 (46262944-46263187)

	50-293, gnl\|bosTau2\|chr26 (14068635-14068392)
	50-293, gnl\|Hg17\|chr10 (104218701-104218944)
	50-293, gnl\|Mm7\|chr19 (46262944-46263187)