Pig1-82D12
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CAGAGTGTCAAGAGCAGAGAGGAGCTGGGCACTGGGCTTATGTGCCTGACTTAAAGGAGC
AGCCTGCCCTTTCCTTGAGCCCCTCTAAGCTGCCCCCTCCAGACCTTGATCTCTGTCTCC
CCATCTGATGACCTCTCCCTCCTGAGGCCACCACTGGGTCCCTTCTGAGGGGTCATTCTC
AGCATGAACTGCATCTCAGATTTCTTTACCTACGAGACCACCAAGTCCGTGGTTGTGAAA
AGCTGGACCATTGGGATCATCAACCGAGCAGTTCAGCTCCTGATCATCTCCTACTTTGTG
GGGTGGGTTTTCTTGCACGAGAAGGCGTACCAGGTGCGGGACACAGCCATTGAGTCCTCG
GTGGTGACCAAGGTGAAGGGCTTTGGACGCTATGCCAACCGAGTCATGGACGTGTCTGAT
TATGTGACCCCACCCCAGGGCACCTCTGTCTTCGTCATCATCACCAAGATGATCGTAACG
GAAAACCAGATGCAAGGATTCTGCCCAGAGAGCGAGGAGAAGTTCCGCTGTGTCTCAGAC
AGCCAGTGTGGGCCCGAGCGCTTCCCAGCT
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CAGAGTGTCAAGAGCAGAGAGGAGCTGGGCACTGGGCTTATGTGCCTGACTTAAAGGAGC
AGCCTGCCCTTTCCTTGAGCCCCTCTAAGCTGCCCCCTCCAGACCTTGATCTCTGTCTCC
CCATCTGATGACCTCTCCCTCCTGAGGCCACCACTGGGTCCCTTCTGAGGGGTCATTCTC
AGCATGAACTGCATCTCAGATTTCTTTACCTACGAGACCACCAAGTCCGTGGTTGTGAAA
AGCTGGACCATTGGGATCATCAACCGAGCAGTTCAGCTCCTGATCATCTCCTACTTTGTG
GGGTGGGTTTTCTTGCACGAGAAGGCGTACCAGGTGCGGGACACAGCCATTGAGTCCTCG
GTGGTGACCAAGGTGAAGGGCTTTGGACGCTATGCCAACCGAGTCATGGACGTGTCTGAT
TATGTGACCCCACCCCAGGGCACCTCTGTCTTCGTCATCATCACCAAGATGATCGTAACG
GAAAACCAGATGCAAGGATTCTGCCCAGAGAGCGAGGAGAAGTTCCGCTGTGTCTCAGAC
AGCCAGTGTGGGCCCGAGCGCTTCCCAGCT
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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302-439, gnl|bosTau2|chr15 (50799547-50799684) |
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302-439, gnl|canFam2|chr18 (41858292-41858144) |
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302-439, gnl|danRer3|chrUn (147575731-147575877) |
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302-439, gnl|dasNov1|scaffold_190281 (3257-3393) |
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302-439, gnl|echTel1|scaffold_307202 (2301-2450) |
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302-439, gnl|fr1|chrUn (279769140-279769289) |
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302-439, gnl|galGal2|chr5 (14298983-14298834) |
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302-439, gnl|hg17|chr11 (56870587-56870736) |
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302-439, gnl|Hg17|chr11 (56870593-56870730) |
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302-439, gnl|loxAfr1|scaffold_10624 (51762-51613) |
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302-439, gnl|mm7|chr2 (84868716-84868567) |
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302-439, gnl|Mm7|chr2 (84868708-84868571) |
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302-439, gnl|monDom2|scaffold_33 (20423016-20423161) |
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302-439, gnl|oryCun1|scaffold_205513 (14903-14754) |
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302-439, gnl|panTro1|chr9 (57779246-57779395) |
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302-439, gnl|rheMac2|chr14 (16073782-16073633) |
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302-439, gnl|rn3|chr3 (68154755-68154606) |
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302-439, gnl|tetNig1|chrUn_random (142227476-142227327) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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302-439, gnl|bosTau2|chr15 (50799547-50799684) |
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302-439, gnl|canFam2|chr18 (41858292-41858144) |
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302-439, gnl|danRer3|chrUn (147575731-147575877) |
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302-439, gnl|dasNov1|scaffold_190281 (3257-3393) |
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302-439, gnl|echTel1|scaffold_307202 (2301-2450) |
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302-439, gnl|fr1|chrUn (279769140-279769289) |
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302-439, gnl|galGal2|chr5 (14298983-14298834) |
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302-439, gnl|hg17|chr11 (56870587-56870736) |
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302-439, gnl|Hg17|chr11 (56870593-56870730) |
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302-439, gnl|loxAfr1|scaffold_10624 (51762-51613) |
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302-439, gnl|mm7|chr2 (84868716-84868567) |
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302-439, gnl|Mm7|chr2 (84868708-84868571) |
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302-439, gnl|monDom2|scaffold_33 (20423016-20423161) |
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302-439, gnl|oryCun1|scaffold_205513 (14903-14754) |
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302-439, gnl|panTro1|chr9 (57779246-57779395) |
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302-439, gnl|rheMac2|chr14 (16073782-16073633) |
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302-439, gnl|rn3|chr3 (68154755-68154606) |
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302-439, gnl|tetNig1|chrUn_random (142227476-142227327) |
