Non-Coding RNA Search

Pig1-82E15

Sequence:


               
               GTGCAGTTTTCGCTCAGGCTCAGCTCTGCTGTGGGAGGCCGTTGAAGGCGGGCTCAGAGC
TGCCGTTTGTGGTTTGGCCCCTCGGTGCCGGTGAAAAGTGGCTGTAATGAGAGTGTGAGG
TGCTGGACACTGTGCCCTGTGTTTGCACAGCTGCCGGCTGGCAGCCGCCGCAGCTGGGAA
GACTGCCCTCGCCCGGCGTCTGCCCACAAACCTCGCTCCGGGGCTGAGAGCAAGGGACGG
AGCCCCGGACGTGACCCTGGTTTCCACAGAGTCCCCTGAGGCCCCAGGCAGCTGGCGGTG
GCTCCCCATTGCCGGGGCTTGTGGTCTGTTTTCCCTCGGACTTGCCCCACCGCCAGCCCG
GCGTTCTGCAGTCCCCCCCGCAGATGGGTGGGCGTGATGTGCTGCCGTGTCTGGGGTGCA
AACGCTCAGGAGGGCAAGTGGACAGGACCCCCATTCCCTGTCTGGCTCCGTATTGGCCAG
GTTTGTCTCTGTGAGTGGAGATCTCTTGGCCAGGCCAGTGGCCCTTGGCCTCTAAACCTT
TCCTGTGGGCGCCTGCGGTTGTTCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGCAGTTTTCGCTCAGGCTCAGCTCTGCTGTGGGAGGCCGTTGAAGGCGGGCTCAGAGC
TGCCGTTTGTGGTTTGGCCCCTCGGTGCCGGTGAAAAGTGGCTGTAATGAGAGTGTGAGG
TGCTGGACACTGTGCCCTGTGTTTGCACAGCTGCCGGCTGGCAGCCGCCGCAGCTGGGAA
GACTGCCCTCGCCCGGCGTCTGCCCACAAACCTCGCTCCGGGGCTGAGAGCAAGGGACGG
AGCCCCGGACGTGACCCTGGTTTCCACAGAGTCCCCTGAGGCCCCAGGCAGCTGGCGGTG
GCTCCCCATTGCCGGGGCTTGTGGTCTGTTTTCCCTCGGACTTGCCCCACCGCCAGCCCG
GCGTTCTGCAGTCCCCCCCGCAGATGGGTGGGCGTGATGTGCTGCCGTGTCTGGGGTGCA
AACGCTCAGGAGGGCAAGTGGACAGGACCCCCATTCCCTGTCTGGCTCCGTATTGGCCAG
GTTTGTCTCTGTGAGTGGAGATCTCTTGGCCAGGCCAGTGGCCCTTGGCCTCTAAACCTT
TCCTGTGGGCGCCTGCGGTTGTTCCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               421-526, + strand, RNAz p=0.999991

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               421-526, + strand, RNAz p=0.999991

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               4-564, gnl|bosTau2|chr3 (23832268-23831705)
               

               
               4-564, gnl|Hg17|chr1 (115925556-115926145)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-564, gnl|bosTau2|chr3 (23832268-23831705)
               

               
               4-564, gnl|Hg17|chr1 (115925556-115926145)

	4-564, gnl\|bosTau2\|chr3 (23832268-23831705)
	4-564, gnl\|Hg17\|chr1 (115925556-115926145)