Pig1-82H17
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATTATATCAGTATTGGGTCTGTTACCCTGAAGGGTGCCACGACTAGGTCTTTGTTCATC TATGTCCAGGAAGGTTTGCCTTGAAAGCAGTTCCGAAAGATAAAGGCTGGAAAGACCGGA CGTGGTAGTGACAGAGCGCTGGGGCGCTTCACATGGTCAAGCAGAGAAATGGGAAGAGGC TGGCTTGCTTCTTCCTGGTCCTGGGTAAGTGGTGGAAGGGCTGGGCTGGGCTTGAAGACG CTTGCCACTTCAGCCTTTGGATTAGAGAAGCCCAGGGCAGAAAAAAAAAGACATTCGGTG AGTCAGCTTGGGGTAGGATGGCCTTGGTTTAAGTGATTGCATGGCACCACGGCTTACTGT TGTTGTTTAACCTCTGGCTGTGTCAAGTGGTTTACTATTGTTCAATAGGTTGGTTGGCTA ACAAGGTGGATGACTCCTTAAAAAAAGTTGGGTTGCTGAGTCATTCGCCCCAGCCTGAGA GGTAATTAGGAACAGCTGGTGCAGATAGGCTCATCACATGCCTCCACTATAAAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATTATATCAGTATTGGGTCTGTTACCCTGAAGGGTGCCACGACTAGGTCTTTGTTCATC TATGTCCAGGAAGGTTTGCCTTGAAAGCAGTTCCGAAAGATAAAGGCTGGAAAGACCGGA CGTGGTAGTGACAGAGCGCTGGGGCGCTTCACATGGTCAAGCAGAGAAATGGGAAGAGGC TGGCTTGCTTCTTCCTGGTCCTGGGTAAGTGGTGGAAGGGCTGGGCTGGGCTTGAAGACG CTTGCCACTTCAGCCTTTGGATTAGAGAAGCCCAGGGCAGAAAAAAAAAGACATTCGGTG AGTCAGCTTGGGGTAGGATGGCCTTGGTTTAAGTGATTGCATGGCACCACGGCTTACTGT TGTTGTTTAACCTCTGGCTGTGTCAAGTGGTTTACTATTGTTCAATAGGTTGGTTGGCTA ACAAGGTGGATGACTCCTTAAAAAAAGTTGGGTTGCTGAGTCATTCGCCCCAGCCTGAGA GGTAATTAGGAACAGCTGGTGCAGATAGGCTCATCACATGCCTCCACTATAAAAG |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 103-269, - strand, RNAz p=0.841464 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 103-269, - strand, RNAz p=0.841464 |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 66-269, gnl|bosTau2|chr1 (6180732-6180522) | |
| 66-269, gnl|canFam2|chr31 (27288303-27288513) | |
| 66-269, gnl|dasNov1|scaffold_12462 (5221-5415) | |
| 66-269, gnl|echTel1|scaffold_306773 (5229-5460) | |
| 66-269, gnl|hg17|chr21 (29594131-29594335) | |
| 66-269, gnl|Hg17|chr21 (29594140-29594333) | |
| 66-269, gnl|loxAfr1|scaffold_16354 (55982-56184) | |
| 66-269, gnl|mm7|chr16 (87743556-87743766) | |
| 66-269, gnl|oryCun1|scaffold_107714 (9034-8807) | |
| 66-269, gnl|panTro1|chr22 (29619214-29619418) | |
| 66-269, gnl|rheMac2|chr3 (17360337-17360132) | |
| 66-269, gnl|rn3|chr11 (27467925-27468125) | |
| 302-535, gnl|bosTau2|chr1 (6180275-6180040) | |
| 302-535, gnl|canFam2|chr31 (27288514-27288826) | |
| 302-535, gnl|echTel1|scaffold_306773 (5461-5758) | |
| 302-535, gnl|hg17|chr21 (29594336-29594638) | |
| 302-535, gnl|Hg17|chr21 (29594370-29594588) | |
| 302-535, gnl|loxAfr1|scaffold_16354 (56185-56473) | |
| 302-535, gnl|mm7|chr16 (87743767-87744071) | |
| 302-535, gnl|Mm7|chr16 (87743802-87744021) | |
| 302-535, gnl|oryCun1|scaffold_107714 (8806-8500) | |
| 302-535, gnl|panTro1|chr22 (29619419-29619721) | |
| 302-535, gnl|rheMac2|chr3 (17360131-17359831) | |
| 302-535, gnl|rn3|chr11 (27468126-27468433) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 66-269, gnl|bosTau2|chr1 (6180732-6180522) | |
| 66-269, gnl|canFam2|chr31 (27288303-27288513) | |
| 66-269, gnl|dasNov1|scaffold_12462 (5221-5415) | |
| 66-269, gnl|echTel1|scaffold_306773 (5229-5460) | |
| 66-269, gnl|hg17|chr21 (29594131-29594335) | |
| 66-269, gnl|Hg17|chr21 (29594140-29594333) | |
| 66-269, gnl|loxAfr1|scaffold_16354 (55982-56184) | |
| 66-269, gnl|mm7|chr16 (87743556-87743766) | |
| 66-269, gnl|oryCun1|scaffold_107714 (9034-8807) | |
| 66-269, gnl|panTro1|chr22 (29619214-29619418) | |
| 66-269, gnl|rheMac2|chr3 (17360337-17360132) | |
| 66-269, gnl|rn3|chr11 (27467925-27468125) | |
| 302-535, gnl|bosTau2|chr1 (6180275-6180040) | |
| 302-535, gnl|canFam2|chr31 (27288514-27288826) | |
| 302-535, gnl|echTel1|scaffold_306773 (5461-5758) | |
| 302-535, gnl|hg17|chr21 (29594336-29594638) | |
| 302-535, gnl|Hg17|chr21 (29594370-29594588) | |
| 302-535, gnl|loxAfr1|scaffold_16354 (56185-56473) | |
| 302-535, gnl|mm7|chr16 (87743767-87744071) | |
| 302-535, gnl|Mm7|chr16 (87743802-87744021) | |
| 302-535, gnl|oryCun1|scaffold_107714 (8806-8500) | |
| 302-535, gnl|panTro1|chr22 (29619419-29619721) | |
| 302-535, gnl|rheMac2|chr3 (17360131-17359831) | |
| 302-535, gnl|rn3|chr11 (27468126-27468433) |