Non-Coding RNA Search

Pig1-83E23

Sequence:


               
               GTAGATACCAATAAAACGGGCTATTTGGACGCTCCTGCGAGAAAGTCTGCAGGAGGGAAA
GCGGTGGGTGGGCGGCAGACTGACCCAGCAGACTCTCTGTCCATCCTGGTGCCCAAAATG
GGGATCTGGAAATCCTTCCGAGCCCGCAAAACCGGGTGAAGAGGCGGCAGGACAGGCGGA
AACTCGGATTCACCTCCTACCACACGGGGTGGAAGGGGAGATAACTTTGGACCCCATCCC
ACACCTCTGCTCTGCTGACACCTTAGGGGAGTTCCCTTAACCCTTTCTCCTGTTCAGCTC
CCCCATCTGGGTGCTTTTAAGGGCCTGGCCTGTTATTCAGTGGAGGGAAGGAGAAATGTC
TGTGCCCCTCTCCCCCTTCCTCTGACCGGGACCAGAGAGAGGCTTGAGAAACTTAAAAGA
GCTTTGACTCGTTGTATGAAACTCTTTTGGAGGCTCAACTTTCCAGGGCCTGATGAATCT
CTGTAGCCCCCTGTGGGGTCTAAATTTCAGGACAGCTAAATTTTAGGACAGGATCTTTGG
ACACACCGGCCCTTTGATTCCCCTCTCTCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTAGATACCAATAAAACGGGCTATTTGGACGCTCCTGCGAGAAAGTCTGCAGGAGGGAAA
GCGGTGGGTGGGCGGCAGACTGACCCAGCAGACTCTCTGTCCATCCTGGTGCCCAAAATG
GGGATCTGGAAATCCTTCCGAGCCCGCAAAACCGGGTGAAGAGGCGGCAGGACAGGCGGA
AACTCGGATTCACCTCCTACCACACGGGGTGGAAGGGGAGATAACTTTGGACCCCATCCC
ACACCTCTGCTCTGCTGACACCTTAGGGGAGTTCCCTTAACCCTTTCTCCTGTTCAGCTC
CCCCATCTGGGTGCTTTTAAGGGCCTGGCCTGTTATTCAGTGGAGGGAAGGAGAAATGTC
TGTGCCCCTCTCCCCCTTCCTCTGACCGGGACCAGAGAGAGGCTTGAGAAACTTAAAAGA
GCTTTGACTCGTTGTATGAAACTCTTTTGGAGGCTCAACTTTCCAGGGCCTGATGAATCT
CTGTAGCCCCCTGTGGGGTCTAAATTTCAGGACAGCTAAATTTTAGGACAGGATCTTTGG
ACACACCGGCCCTTTGATTCCCCTCTCTCCTC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               191-286, + strand, RNAz p=0.902647

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               191-286, + strand, RNAz p=0.902647

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-572, gnl|bosTau2|chr19 (31244472-31243910)
               

               
               1-572, gnl|Hg17|chr17 (44060108-44059500)
               

               
               1-572, gnl|Mm7|chr11 (96379187-96379707)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-572, gnl|bosTau2|chr19 (31244472-31243910)
               

               
               1-572, gnl|Hg17|chr17 (44060108-44059500)
               

               
               1-572, gnl|Mm7|chr11 (96379187-96379707)

	1-572, gnl\|bosTau2\|chr19 (31244472-31243910)
	1-572, gnl\|Hg17\|chr17 (44060108-44059500)
	1-572, gnl\|Mm7\|chr11 (96379187-96379707)