Non-Coding RNA Search

Pig1-86B10

Sequence:


               
               ATCAGCGACCAGCTCTTGCTGGAGATCAACGATGTGACCAGGGCCTGGGGGCTGGAGGTG
GACCGCGTGGAGCTGGCAGTGGAGGCCGTGCTCCAGCCACCCCAGGACAGCCCGACTGGG
CCCAGCCTGGACAGCACCCTTCAGCAGCTGGCCCTCCACTTCCTGGGAGGAGGCCTGTCT
TCAGTGGCAGGAGGTGCCCCTCTCCTGGGTACAGCAGATACCTTGGAGATGGTGAGTGAG
GTTGAGCCTCCTGCCTCTCACGCTGGTGCCGGGTCCAGCCCCAAACAGCCTGTGGCCGAG
GGGCTGCTGATGGCCCTGAAACCCTTCCTGTCTGAGGCCCTGGTCAGCCATGTTGGGGCC
TGCTACCAGTTCAATGTCATCCTTCCCGGTGGCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCAGCGACCAGCTCTTGCTGGAGATCAACGATGTGACCAGGGCCTGGGGGCTGGAGGTG
GACCGCGTGGAGCTGGCAGTGGAGGCCGTGCTCCAGCCACCCCAGGACAGCCCGACTGGG
CCCAGCCTGGACAGCACCCTTCAGCAGCTGGCCCTCCACTTCCTGGGAGGAGGCCTGTCT
TCAGTGGCAGGAGGTGCCCCTCTCCTGGGTACAGCAGATACCTTGGAGATGGTGAGTGAG
GTTGAGCCTCCTGCCTCTCACGCTGGTGCCGGGTCCAGCCCCAAACAGCCTGTGGCCGAG
GGGCTGCTGATGGCCCTGAAACCCTTCCTGTCTGAGGCCCTGGTCAGCCATGTTGGGGCC
TGCTACCAGTTCAATGTCATCCTTCCCGGTGGCAC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               13-131, + strand, RNAz p=0.763734

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               13-131, + strand, RNAz p=0.763734

Predicted microRNA(s): 1 entry(ies)

More info

Predicted microRNA(s): 1 entry(ies)

Help | Less info


               
               33-205, - strand, RNAmicro p=0.996796

Predicted microRNA(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               33-205, - strand, RNAmicro p=0.996796

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               13-214, gnl|bosTau2|chr21 (23960225-23960024)
               

               
               13-214, gnl|Hg17|chr15 (72064913-72064712)
               

               
               13-214, gnl|Mm7|chr9 (58288677-58288878)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-214, gnl|bosTau2|chr21 (23960225-23960024)
               

               
               13-214, gnl|Hg17|chr15 (72064913-72064712)
               

               
               13-214, gnl|Mm7|chr9 (58288677-58288878)

	13-214, gnl\|bosTau2\|chr21 (23960225-23960024)
	13-214, gnl\|Hg17\|chr15 (72064913-72064712)
	13-214, gnl\|Mm7\|chr9 (58288677-58288878)