Non-Coding RNA Search

Pig1-86L19

Sequence:


               
               GATTCTTTTAGGATCCTGTTACTGTAAATTGAACTATTCATCTTTTCCAGCTTTTTGACT
GATATTTTCTATATTTATTAAAAGAGCTACAGGAAACTGAAAAGCTATCAAAGCTATTTA
TAAAACAACATAAAGCAATTGTTTGAATAGACTAGGCAATGACATTATTTTGATTAAAAA
AAACAGTATTTTTTTCTTGTAATCTTTTTTTTCCTTTTTAAAGGACACAGAGATAGCATG
GATTTACAGAGGTTTAAAGAAACACCAAACAAGATAAAAGAAATATTATCTGTAAGTAAA
TCTTTATAGCTGTTCAATTTATCTCGCTACTTTGGGGTTTAGTTCAAAATAGAATTAAAC
ATATTTTTCTGTAAAAATATAGTTTTAGCAGAGACCATTGTCAACATGATGATCCTAAAT
AAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATTCTTTTAGGATCCTGTTACTGTAAATTGAACTATTCATCTTTTCCAGCTTTTTGACT
GATATTTTCTATATTTATTAAAAGAGCTACAGGAAACTGAAAAGCTATCAAAGCTATTTA
TAAAACAACATAAAGCAATTGTTTGAATAGACTAGGCAATGACATTATTTTGATTAAAAA
AAACAGTATTTTTTTCTTGTAATCTTTTTTTTCCTTTTTAAAGGACACAGAGATAGCATG
GATTTACAGAGGTTTAAAGAAACACCAAACAAGATAAAAGAAATATTATCTGTAAGTAAA
TCTTTATAGCTGTTCAATTTATCTCGCTACTTTGGGGTTTAGTTCAAAATAGAATTAAAC
ATATTTTTCTGTAAAAATATAGTTTTAGCAGAGACCATTGTCAACATGATGATCCTAAAT
AAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               198-306, + strand, RNAz p=0.940693

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               198-306, + strand, RNAz p=0.940693

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               5-421, gnl|bosTau2|chr3 (16038832-16039248)
               

               
               5-421, gnl|Hg17|chr15 (48669327-48668946)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-421, gnl|bosTau2|chr3 (16038832-16039248)
               

               
               5-421, gnl|Hg17|chr15 (48669327-48668946)

	5-421, gnl\|bosTau2\|chr3 (16038832-16039248)
	5-421, gnl\|Hg17\|chr15 (48669327-48668946)