Pig1-86O17
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GCCCTAAGGTGGGCAGTGTGCCAGGGTCCCTCACAGCCTCCTCAAGCTCCATCCAGGCTA
TGGGCATCAAGACAGCACTGCCTGCAGCGGAGGTGGGCCTGTACTCCCTGGTGCTGAGCG
GGGCCCTAGCTTATGCTGGCCGGGGCCTCCTTGAGGCTTCACAAGATGGGGCCCACAGGA
AGGCCTTCCGGGAGTCTGTGCGACCTGGCTGGGAGTACATTGGCCGGAAGATGGATGTGG
CTGACTTCGAGTGGGTGATGTGGTTCACCTCCTTCCGCAATGTCATCGTCTTTGCCCTCT
CCGGACACGTGCTGTTCGCTAAACTCTGCACGATGGTTGCCCCCCAGCTCCGCTCCTGGA
TGTATGCTGTGTATGGGGCCCTGGCCGTGGTGGGCACAATGGGCCCGTGGTACCTGCTGC
TGTTGCTGGGCCACTGTGTGGGCCTCTATATGGTCTCACTCTTGGGCCAGCCCTGGCTCT
GTCTTGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GCCCTAAGGTGGGCAGTGTGCCAGGGTCCCTCACAGCCTCCTCAAGCTCCATCCAGGCTA
TGGGCATCAAGACAGCACTGCCTGCAGCGGAGGTGGGCCTGTACTCCCTGGTGCTGAGCG
GGGCCCTAGCTTATGCTGGCCGGGGCCTCCTTGAGGCTTCACAAGATGGGGCCCACAGGA
AGGCCTTCCGGGAGTCTGTGCGACCTGGCTGGGAGTACATTGGCCGGAAGATGGATGTGG
CTGACTTCGAGTGGGTGATGTGGTTCACCTCCTTCCGCAATGTCATCGTCTTTGCCCTCT
CCGGACACGTGCTGTTCGCTAAACTCTGCACGATGGTTGCCCCCCAGCTCCGCTCCTGGA
TGTATGCTGTGTATGGGGCCCTGGCCGTGGTGGGCACAATGGGCCCGTGGTACCTGCTGC
TGTTGCTGGGCCACTGTGTGGGCCTCTATATGGTCTCACTCTTGGGCCAGCCCTGGCTCT
GTCTTGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
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40-165, gnl|bosTau2|chr22 (7762785-7762661) |
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40-165, gnl|Hg17|chr3 (42717340-42717217) |
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40-165, gnl|Mm7|chr9 (121491311-121491187) |
| |
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233-344, gnl|bosTau2|chr22 (7761638-7761527) |
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233-344, gnl|canFam2|chr23 (14868123-14868249) |
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233-344, gnl|danRer3|chr24 (9528838-9528717) |
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233-344, gnl|echTel1|scaffold_316638 (45326-45203) |
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233-344, gnl|fr1|chrUn (122646801-122646681) |
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233-344, gnl|galGal2|chr2 (1585807-1585933) |
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233-344, gnl|hg17|chr3 (42715525-42715651) |
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233-344, gnl|Hg17|chr3 (42715642-42715532) |
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233-344, gnl|mm7|chr9 (121490318-121490442) |
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233-344, gnl|Mm7|chr9 (121490435-121490324) |
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233-344, gnl|monDom2|scaffold_5 (77878166-77878289) |
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233-344, gnl|oryCun1|scaffold_213366 (55851-55977) |
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233-344, gnl|panTro1|chr2 (43920619-43920745) |
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233-344, gnl|rheMac2|chr2 (93872650-93872524) |
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233-344, gnl|rn3|chr8 (127168551-127168427) |
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233-344, gnl|tetNig1|chr6 (3106937-3107057) |
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233-344, gnl|xenTro1|scaffold_451 (234824-234947) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
40-165, gnl|bosTau2|chr22 (7762785-7762661) |
|
40-165, gnl|Hg17|chr3 (42717340-42717217) |
|
40-165, gnl|Mm7|chr9 (121491311-121491187) |
| |
|
233-344, gnl|bosTau2|chr22 (7761638-7761527) |
|
233-344, gnl|canFam2|chr23 (14868123-14868249) |
|
233-344, gnl|danRer3|chr24 (9528838-9528717) |
|
233-344, gnl|echTel1|scaffold_316638 (45326-45203) |
|
233-344, gnl|fr1|chrUn (122646801-122646681) |
|
233-344, gnl|galGal2|chr2 (1585807-1585933) |
|
233-344, gnl|hg17|chr3 (42715525-42715651) |
|
233-344, gnl|Hg17|chr3 (42715642-42715532) |
|
233-344, gnl|mm7|chr9 (121490318-121490442) |
|
233-344, gnl|Mm7|chr9 (121490435-121490324) |
|
233-344, gnl|monDom2|scaffold_5 (77878166-77878289) |
|
233-344, gnl|oryCun1|scaffold_213366 (55851-55977) |
|
233-344, gnl|panTro1|chr2 (43920619-43920745) |
|
233-344, gnl|rheMac2|chr2 (93872650-93872524) |
|
233-344, gnl|rn3|chr8 (127168551-127168427) |
|
233-344, gnl|tetNig1|chr6 (3106937-3107057) |
|
233-344, gnl|xenTro1|scaffold_451 (234824-234947) |
