Non-Coding RNA Search

Pig1-88H19

Sequence:


               
               TGCAAAGATGATAAAGAGATGTAGTACGTGGTCACTTTCTAGAAGTGTCTGAGCAGATTC
TTACTGATCACTGGGGGGAGGGAGGTGTCACAGAGAATTCTAGCCTTGTTGGGAAGATTA
GAGACTCTTTAAGATCCTGAAGATTCCTTGGGCCAAGAGGTATTTATAAATATGAATTCT
CCATTCTTCATTCATCACGAAGACTGGAATATGGGGCTTTAAAAAAAAAGCTTCTGAGAA
AATAACTAAAGAGTTGTCAGGTTTTTTTATTTTCTGGCTTGAGGAGATTCTTTCCTCCTC
ATCCCTTTATCCTATCCCTTGGCATTTAAACTAGGGGATCATTTCTGCAGGAGCTGCTTG
AATCATTCTAGGTATGAGGACTTGGCCAGCGGTCAGGTGAGGCATGTGGACATGAGAGTG
CTGGATCCTGCTCCCAGAGCCACTTCTACCTGATGGGAAAGCCATTGAACCTCTGTGCCT
CTTCCTTCCGGGAAGAATTATGCCCACTTGTAAATACAGATGAACGTGGCTGGGCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCAAAGATGATAAAGAGATGTAGTACGTGGTCACTTTCTAGAAGTGTCTGAGCAGATTC
TTACTGATCACTGGGGGGAGGGAGGTGTCACAGAGAATTCTAGCCTTGTTGGGAAGATTA
GAGACTCTTTAAGATCCTGAAGATTCCTTGGGCCAAGAGGTATTTATAAATATGAATTCT
CCATTCTTCATTCATCACGAAGACTGGAATATGGGGCTTTAAAAAAAAAGCTTCTGAGAA
AATAACTAAAGAGTTGTCAGGTTTTTTTATTTTCTGGCTTGAGGAGATTCTTTCCTCCTC
ATCCCTTTATCCTATCCCTTGGCATTTAAACTAGGGGATCATTTCTGCAGGAGCTGCTTG
AATCATTCTAGGTATGAGGACTTGGCCAGCGGTCAGGTGAGGCATGTGGACATGAGAGTG
CTGGATCCTGCTCCCAGAGCCACTTCTACCTGATGGGAAAGCCATTGAACCTCTGTGCCT
CTTCCTTCCGGGAAGAATTATGCCCACTTGTAAATACAGATGAACGTGGCTGGGCTC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               227-400, + strand, RNAz p=1

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               227-400, + strand, RNAz p=1

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-537, gnl|bosTau2|chrX (23792610-23792062)
               

               
               1-537, gnl|Hg17|chrX (71307155-71306494)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-537, gnl|bosTau2|chrX (23792610-23792062)
               

               
               1-537, gnl|Hg17|chrX (71307155-71306494)

	1-537, gnl\|bosTau2\|chrX (23792610-23792062)
	1-537, gnl\|Hg17\|chrX (71307155-71306494)