Non-Coding RNA Search

Pig1-89J13

Sequence:


               
               AATTATTTTACTGGCGCCACATGAGAGGCAGGAACATGGTTCACACGGCATGTTCTGGAA
AATAAGAAAATGCAGAACCCCAGAGAGGCTGGTCTGAAGAAACCTATTCTTGGCCTTGGA
AGGCAGGGTAGAGGGTAAAGACTTTTTAAAGGAGGGGCAGAGAAACAGCCATAGAACTGT
GAACAAATGAGAAGTAAGCCGTCTTCCTAAAGGTTGTACCCAAGATGGGCCCTCACTGAA
ACTCACCAAATCAACCCCATCTACTGCCCATTTCTGCTGGTTCAGGCAGGACTAAACTGC
AGCTAGGAGAGAAGCATCTCTTAAAGGTAGACAGTTTTGAGCAATGGCTTTCATTGCTTT
CTTCCTATTAAGATCCGAGACTATGGGGAAAAAAGAAGGGCTACGAGAGAATAAATAGAT
CTGAAAGATTGGCAAATGCAACCCAGACTTCTAGATAAAAGTTGGAGTTAATGGAACCAT
GGGCTCTCTAACAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTATTTTACTGGCGCCACATGAGAGGCAGGAACATGGTTCACACGGCATGTTCTGGAA
AATAAGAAAATGCAGAACCCCAGAGAGGCTGGTCTGAAGAAACCTATTCTTGGCCTTGGA
AGGCAGGGTAGAGGGTAAAGACTTTTTAAAGGAGGGGCAGAGAAACAGCCATAGAACTGT
GAACAAATGAGAAGTAAGCCGTCTTCCTAAAGGTTGTACCCAAGATGGGCCCTCACTGAA
ACTCACCAAATCAACCCCATCTACTGCCCATTTCTGCTGGTTCAGGCAGGACTAAACTGC
AGCTAGGAGAGAAGCATCTCTTAAAGGTAGACAGTTTTGAGCAATGGCTTTCATTGCTTT
CTTCCTATTAAGATCCGAGACTATGGGGAAAAAAGAAGGGCTACGAGAGAATAAATAGAT
CTGAAAGATTGGCAAATGCAACCCAGACTTCTAGATAAAAGTTGGAGTTAATGGAACCAT
GGGCTCTCTAACAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               47-189, + strand, RNAz p=0.880833

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               47-189, + strand, RNAz p=0.880833

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               9-343, gnl|bosTau2|chr21 (15895657-15896003)
               

               
               9-343, gnl|Hg17|chr15 (87655990-87655040)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-343, gnl|bosTau2|chr21 (15895657-15896003)
               

               
               9-343, gnl|Hg17|chr15 (87655990-87655040)

	9-343, gnl\|bosTau2\|chr21 (15895657-15896003)
	9-343, gnl\|Hg17\|chr15 (87655990-87655040)