Pig1-90B07
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGGAACCAGGAGACAGGCGAGCTCTTAACCTGCCTTCAGGCCTAGGCGGGGTGGCAGCC CCTACTGTGGCAAGCTGGGTGCTGCACCATCTGTGGTCGGGCCCCTTTACCCCGCCCACC CGTGGGCTGTGCCCTGACGGACACTTGGGGGGAGCTGGCCTGTGGGTGACCAGGCCTTGC ACACCTGTGGCTGCTGGTGCTCTGGAGCCAGGTGTCATCAACGGGCGGGGGCACCGGCGT GGACACGGTGCTGGTGCTGATGTCCCCAATGATGTTGAGTGCCTCCTTGAGCGCATGGTA CATGCGCAGCATGTCGTCCCGCCGCTGGGCCTGGTCAGCTGACTCCTCCATGAGGCTGCT CTGGTCGGCTGACGAGTACAGGTAGGCCAGCAGCTCATGGTGGATGAAGGCCTTCGTCTG GGGGCAAGGGTTGGAGAAGTCAGGGCTTCCCACCACCCCAGCCAAGGACTCGGCTGACCA CTGTGCTAGAAGAACGTCCAGCACACTTGGTGGGGCAGTGTCTTTAACTTTACTGCAGAT CATGGGGGACGTTTACAACAAGGTGAGTTTTCCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGGAACCAGGAGACAGGCGAGCTCTTAACCTGCCTTCAGGCCTAGGCGGGGTGGCAGCC CCTACTGTGGCAAGCTGGGTGCTGCACCATCTGTGGTCGGGCCCCTTTACCCCGCCCACC CGTGGGCTGTGCCCTGACGGACACTTGGGGGGAGCTGGCCTGTGGGTGACCAGGCCTTGC ACACCTGTGGCTGCTGGTGCTCTGGAGCCAGGTGTCATCAACGGGCGGGGGCACCGGCGT GGACACGGTGCTGGTGCTGATGTCCCCAATGATGTTGAGTGCCTCCTTGAGCGCATGGTA CATGCGCAGCATGTCGTCCCGCCGCTGGGCCTGGTCAGCTGACTCCTCCATGAGGCTGCT CTGGTCGGCTGACGAGTACAGGTAGGCCAGCAGCTCATGGTGGATGAAGGCCTTCGTCTG GGGGCAAGGGTTGGAGAAGTCAGGGCTTCCCACCACCCCAGCCAAGGACTCGGCTGACCA CTGTGCTAGAAGAACGTCCAGCACACTTGGTGGGGCAGTGTCTTTAACTTTACTGCAGAT CATGGGGGACGTTTACAACAAGGTGAGTTTTCCA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 34-142, + strand, RNAz p=0.952897 | |
| 398-557, + strand, RNAz p=0.994821 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 34-142, + strand, RNAz p=0.952897 | |
| 398-557, + strand, RNAz p=0.994821 |
| Aligned organism(s): 48 entry(ies) | More info |
| Aligned organism(s): 48 entry(ies) | Help | Less info |
| 34-151, gnl|bosTau2|chr7 (9930115-9929994) | |
| 34-151, gnl|canFam2|chr20 (53406045-53405982) | |
| 34-151, gnl|fr1|chrUn (207664850-207664927) | |
| 34-151, gnl|hg17|chr19 (10800987-10801064) | |
| 34-151, gnl|Hg17|chr19 (10801099-10800999) | |
| 34-151, gnl|loxAfr1|scaffold_122274 (4533-4625) | |
| 34-151, gnl|mm7|chr9 (21384048-21384146) | |
| 34-151, gnl|Mm7|chr9 (21384208-21384072) | |
| 34-151, gnl|monDom2|scaffold_106 (2757906-2757971) | |
| 34-151, gnl|panTro1|chr20 (11197908-11197985) | |
| 34-151, gnl|rheMac2|chr19 (10635277-10635367) | |
| 34-151, gnl|rn3|chr8 (20608336-20608434) | |
| 158-572, gnl|bosTau2|chr7 (9929949-9929538) | |
| 202-420, gnl|bosTau2|chr11 (78144460-78144242) | |
| 202-420, gnl|canFam2|chr9 (58601632-58601475) | |
| 202-420, gnl|canFam2|chr9 (58601636-58601475) | |
| 202-420, gnl|danRer3|chr23 (37876096-37876251) | |
| 202-420, gnl|danRer3|chr23 (37876096-37876251) | |
| 202-420, gnl|dasNov1|scaffold_430 (161730-161573) | |
| 202-420, gnl|dasNov1|scaffold_430 (161734-161573) | |
| 202-420, gnl|echTel1|scaffold_307138 (11807-11653) | |
| 202-420, gnl|echTel1|scaffold_307138 (11811-11653) | |
| 202-420, gnl|fr1|chrUn (160327057-160327214) | |
| 202-420, gnl|fr1|chrUn (160327055-160327214) | |
| 202-420, gnl|galGal2|chr17 (5718310-5718467) | |
| 202-420, gnl|galGal2|chr17 (5718309-5718467) | |
| 202-420, gnl|hg17|chr10 (30686087-30686244) | |
| 202-420, gnl|hg17|chr9 (128091942-128092103) | |
| 202-420, gnl|Hg17|chr9 (128092163-128091945) | |
| 202-420, gnl|loxAfr1|scaffold_122274 (4269-4426) | |
| 202-420, gnl|loxAfr1|scaffold_122274 (4265-4426) | |
| 202-420, gnl|mm7|chr2 (32320240-32320083) | |
| 202-420, gnl|mm7|chr2 (32320244-32320083) | |
| 202-420, gnl|Mm7|chr2 (32320021-32320239) | |
| 202-420, gnl|monDom2|scaffold_51 (2774570-2774727) | |
| 202-420, gnl|monDom2|scaffold_51 (2774566-2774727) | |
| 202-420, gnl|oryCun1|scaffold_209544 (1296-1454) | |
| 202-420, gnl|oryCun1|scaffold_209544 (1291-1454) | |
| 202-420, gnl|panTro1|chr11 (112925921-112926077) | |
| 202-420, gnl|panTro1|chr8 (31061692-31061849) | |
| 202-420, gnl|rheMac2|chr15 (10629906-10629745) | |
| 202-420, gnl|rheMac2|chr9 (30484335-30484492) | |
| 202-420, gnl|rn3|chr3 (11335721-11335564) | |
| 202-420, gnl|rn3|chr3 (11335725-11335564) | |
| 202-420, gnl|tetNig1|chr4 (2701900-2702057) | |
| 202-420, gnl|tetNig1|chr4 (2701896-2702057) | |
| 202-420, gnl|xenTro1|scaffold_82 (353861-353704) | |
| 202-420, gnl|xenTro1|scaffold_82 (353865-353704) |
| Aligned organism(s): 48 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 34-151, gnl|bosTau2|chr7 (9930115-9929994) | |
| 34-151, gnl|canFam2|chr20 (53406045-53405982) | |
| 34-151, gnl|fr1|chrUn (207664850-207664927) | |
| 34-151, gnl|hg17|chr19 (10800987-10801064) | |
| 34-151, gnl|Hg17|chr19 (10801099-10800999) | |
| 34-151, gnl|loxAfr1|scaffold_122274 (4533-4625) | |
| 34-151, gnl|mm7|chr9 (21384048-21384146) | |
| 34-151, gnl|Mm7|chr9 (21384208-21384072) | |
| 34-151, gnl|monDom2|scaffold_106 (2757906-2757971) | |
| 34-151, gnl|panTro1|chr20 (11197908-11197985) | |
| 34-151, gnl|rheMac2|chr19 (10635277-10635367) | |
| 34-151, gnl|rn3|chr8 (20608336-20608434) | |
| 158-572, gnl|bosTau2|chr7 (9929949-9929538) | |
| 202-420, gnl|bosTau2|chr11 (78144460-78144242) | |
| 202-420, gnl|canFam2|chr9 (58601632-58601475) | |
| 202-420, gnl|canFam2|chr9 (58601636-58601475) | |
| 202-420, gnl|danRer3|chr23 (37876096-37876251) | |
| 202-420, gnl|danRer3|chr23 (37876096-37876251) | |
| 202-420, gnl|dasNov1|scaffold_430 (161730-161573) | |
| 202-420, gnl|dasNov1|scaffold_430 (161734-161573) | |
| 202-420, gnl|echTel1|scaffold_307138 (11807-11653) | |
| 202-420, gnl|echTel1|scaffold_307138 (11811-11653) | |
| 202-420, gnl|fr1|chrUn (160327057-160327214) | |
| 202-420, gnl|fr1|chrUn (160327055-160327214) | |
| 202-420, gnl|galGal2|chr17 (5718310-5718467) | |
| 202-420, gnl|galGal2|chr17 (5718309-5718467) | |
| 202-420, gnl|hg17|chr10 (30686087-30686244) | |
| 202-420, gnl|hg17|chr9 (128091942-128092103) | |
| 202-420, gnl|Hg17|chr9 (128092163-128091945) | |
| 202-420, gnl|loxAfr1|scaffold_122274 (4269-4426) | |
| 202-420, gnl|loxAfr1|scaffold_122274 (4265-4426) | |
| 202-420, gnl|mm7|chr2 (32320240-32320083) | |
| 202-420, gnl|mm7|chr2 (32320244-32320083) | |
| 202-420, gnl|Mm7|chr2 (32320021-32320239) | |
| 202-420, gnl|monDom2|scaffold_51 (2774570-2774727) | |
| 202-420, gnl|monDom2|scaffold_51 (2774566-2774727) | |
| 202-420, gnl|oryCun1|scaffold_209544 (1296-1454) | |
| 202-420, gnl|oryCun1|scaffold_209544 (1291-1454) | |
| 202-420, gnl|panTro1|chr11 (112925921-112926077) | |
| 202-420, gnl|panTro1|chr8 (31061692-31061849) | |
| 202-420, gnl|rheMac2|chr15 (10629906-10629745) | |
| 202-420, gnl|rheMac2|chr9 (30484335-30484492) | |
| 202-420, gnl|rn3|chr3 (11335721-11335564) | |
| 202-420, gnl|rn3|chr3 (11335725-11335564) | |
| 202-420, gnl|tetNig1|chr4 (2701900-2702057) | |
| 202-420, gnl|tetNig1|chr4 (2701896-2702057) | |
| 202-420, gnl|xenTro1|scaffold_82 (353861-353704) | |
| 202-420, gnl|xenTro1|scaffold_82 (353865-353704) |