Pig1-92D11
|
GCTGGGGGTTCTAGAGGAAACCCTGGGAGAAGGAGCCAGCCAGCACCTGGCTCAGCATCT
GTCCGAGTTGCAAGTGAGAGTTGAGGGGGGCATTGGCGTGGTCCATCGTGAATTGCCAGA
GAAAAGCTGGCCCCTGGCCATCACCCTGAGCTCTTGGCACTGACCTGAAAGCATCTTTGT
GCTGAGAATGAGGCCCAGTCAGTTCCTGGAAAGACCCTGAAAGCCCCAGTGGTGTTGCAG
CGTGACTTCCACACTGGGGGCCCTGGGTCAGGGTGGGACCAGCTTCAACAGAGGCTTTTG
TCACTGTGGCTGGGAAAACACGCCACGTGGGATGATGGAAGGAGCCTGGTCGTGGAGCTG
TGCTGGCAATTTGAGTCTGTCCTTCTGACCTTGGGCTGGTTATGTCCTGTGGGTTCAGTT
TTTTCCTCTGAGAAATGGGCACAGGGGACCTCCCAGAGCTGGCCAGGAGCTCAGACAGCC
TGTGAGCGGCCAGGGGGGCGGGGGTAGGGGGAGCTGAGCACAGGGCTGGGGCATGATCGC
TCGCTGTGTTTGTTAATGCCTGGAGCCC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCTGGGGGTTCTAGAGGAAACCCTGGGAGAAGGAGCCAGCCAGCACCTGGCTCAGCATCT
GTCCGAGTTGCAAGTGAGAGTTGAGGGGGGCATTGGCGTGGTCCATCGTGAATTGCCAGA
GAAAAGCTGGCCCCTGGCCATCACCCTGAGCTCTTGGCACTGACCTGAAAGCATCTTTGT
GCTGAGAATGAGGCCCAGTCAGTTCCTGGAAAGACCCTGAAAGCCCCAGTGGTGTTGCAG
CGTGACTTCCACACTGGGGGCCCTGGGTCAGGGTGGGACCAGCTTCAACAGAGGCTTTTG
TCACTGTGGCTGGGAAAACACGCCACGTGGGATGATGGAAGGAGCCTGGTCGTGGAGCTG
TGCTGGCAATTTGAGTCTGTCCTTCTGACCTTGGGCTGGTTATGTCCTGTGGGTTCAGTT
TTTTCCTCTGAGAAATGGGCACAGGGGACCTCCCAGAGCTGGCCAGGAGCTCAGACAGCC
TGTGAGCGGCCAGGGGGGCGGGGGTAGGGGGAGCTGAGCACAGGGCTGGGGCATGATCGC
TCGCTGTGTTTGTTAATGCCTGGAGCCC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
72-295, gnl|bosTau2|chr21 (40861839-40861613) |
|
72-295, gnl|canFam2|chr8 (67313505-67313669) |
|
72-295, gnl|hg17|chr14 (94958640-94958816) |
|
72-295, gnl|Hg17|chr14 (94958868-94958639) |
|
72-295, gnl|loxAfr1|scaffold_10788 (27157-27315) |
|
72-295, gnl|panTro1|chr15 (95404392-95404568) |
|
72-295, gnl|rheMac2|chr7 (158669639-158669814) |
| |
|
354-499, gnl|bosTau2|chr21 (40861250-40861106) |
|
354-499, gnl|canFam2|chr8 (67313010-67313457) |
|
354-499, gnl|hg17|chr14 (94958045-94958597) |
|
354-499, gnl|Hg17|chr14 (94958551-94958387) |
|
354-499, gnl|loxAfr1|scaffold_10788 (26373-27116) |
|
354-499, gnl|panTro1|chr15 (95403797-95404349) |
|
354-499, gnl|rheMac2|chr7 (158669044-158669596) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
72-295, gnl|bosTau2|chr21 (40861839-40861613) |
|
72-295, gnl|canFam2|chr8 (67313505-67313669) |
|
72-295, gnl|hg17|chr14 (94958640-94958816) |
|
72-295, gnl|Hg17|chr14 (94958868-94958639) |
|
72-295, gnl|loxAfr1|scaffold_10788 (27157-27315) |
|
72-295, gnl|panTro1|chr15 (95404392-95404568) |
|
72-295, gnl|rheMac2|chr7 (158669639-158669814) |
| |
|
354-499, gnl|bosTau2|chr21 (40861250-40861106) |
|
354-499, gnl|canFam2|chr8 (67313010-67313457) |
|
354-499, gnl|hg17|chr14 (94958045-94958597) |
|
354-499, gnl|Hg17|chr14 (94958551-94958387) |
|
354-499, gnl|loxAfr1|scaffold_10788 (26373-27116) |
|
354-499, gnl|panTro1|chr15 (95403797-95404349) |
|
354-499, gnl|rheMac2|chr7 (158669044-158669596) |
