Pig1-92J11
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTTGACCCTCCTAAAGTCTTCATCCTGGTTCTCAGAGAAAAGTTCTTCCCATTGAGCAG AAGGGGAAACAGACTCATGGAGGGGGCAGGGGAGTGGGGTCATTAGTAGAGCCAGGTCTT CCAAGTCTAGCCTTCAAGCATCATATAAAAGCAGTTTTGTTCTTTAATTACTGTGACTTT TTTGTTGTTGTTGTTGTTGTTTCTTTGGGTCTGTACCCATGGTatatggaggttcccagg caaggggtcgaattggagccatagctgctggcctgcaccacagccacgacagtgtgggat ctgagccacgtcttcgacctacaccacagctcatggcaaggcgggatccctaacccactg ggcaaggccaggtatcaaacctttgtcctcatggatacttgggttcattaacaactgagc catgacagggaactccTAATTATTGTGACTTATAAAATGAGCTCCAAGTTATCTATTTTC TTTCCACAGGGTCTGTATGAAGCAACACAAGAAGTTGACCCAGGCCATCCAGAAAGCCAG AGATCATGGTCTTCTCAGGTACCACATTCCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTTGACCCTCCTAAAGTCTTCATCCTGGTTCTCAGAGAAAAGTTCTTCCCATTGAGCAG AAGGGGAAACAGACTCATGGAGGGGGCAGGGGAGTGGGGTCATTAGTAGAGCCAGGTCTT CCAAGTCTAGCCTTCAAGCATCATATAAAAGCAGTTTTGTTCTTTAATTACTGTGACTTT TTTGTTGTTGTTGTTGTTGTTTCTTTGGGTCTGTACCCATGGTatatggaggttcccagg caaggggtcgaattggagccatagctgctggcctgcaccacagccacgacagtgtgggat ctgagccacgtcttcgacctacaccacagctcatggcaaggcgggatccctaacccactg ggcaaggccaggtatcaaacctttgtcctcatggatacttgggttcattaacaactgagc catgacagggaactccTAATTATTGTGACTTATAAAATGAGCTCCAAGTTATCTATTTTC TTTCCACAGGGTCTGTATGAAGCAACACAAGAAGTTGACCCAGGCCATCCAGAAAGCCAG AGATCATGGTCTTCTCAGGTACCACATTCCCC |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 5-113, + strand, RNAz p=0.98859 | |
| 437-550, - strand, RNAz p=0.576905 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 5-113, + strand, RNAz p=0.98859 | |
| 437-550, - strand, RNAz p=0.576905 |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 5-179, gnl|bosTau2|chr23 (20869545-20869371) | |
| 5-179, gnl|canFam2|chr12 (3441352-3441649) | |
| 5-179, gnl|dasNov1|scaffold_82003 (2850-2568) | |
| 5-179, gnl|echTel1|scaffold_315780 (45483-45778) | |
| 5-179, gnl|hg17|chr6 (30700419-30700717) | |
| 5-179, gnl|Hg17|chr6 (30700426-30700610) | |
| 5-179, gnl|loxAfr1|scaffold_14465 (32572-32250) | |
| 5-179, gnl|mm7|chr17 (34015774-34015577) | |
| 5-179, gnl|monDom2|scaffold_42 (18687148-18686832) | |
| 5-179, gnl|oryCun1|scaffold_204107 (75703-76010) | |
| 5-179, gnl|panTro1|chr5 (31158527-31158825) | |
| 5-179, gnl|rheMac2|chr4 (30203190-30203488) | |
| 5-179, gnl|rn3|chr20 (2990930-2991144) | |
| 437-550, gnl|bosTau2|chr23 (20869385-20869271) | |
| 437-550, gnl|canFam2|chr12 (3441352-3441649) | |
| 437-550, gnl|dasNov1|scaffold_82003 (2850-2568) | |
| 437-550, gnl|echTel1|scaffold_315780 (45483-45778) | |
| 437-550, gnl|hg17|chr6 (30700419-30700717) | |
| 437-550, gnl|Hg17|chr6 (30700596-30700700) | |
| 437-550, gnl|loxAfr1|scaffold_14465 (32572-32250) | |
| 437-550, gnl|mm7|chr17 (34015774-34015577) | |
| 437-550, gnl|monDom2|scaffold_42 (18687148-18686832) | |
| 437-550, gnl|oryCun1|scaffold_204107 (75703-76010) | |
| 437-550, gnl|panTro1|chr5 (31158527-31158825) | |
| 437-550, gnl|rheMac2|chr4 (30203190-30203488) | |
| 437-550, gnl|rn3|chr20 (2990930-2991144) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-179, gnl|bosTau2|chr23 (20869545-20869371) | |
| 5-179, gnl|canFam2|chr12 (3441352-3441649) | |
| 5-179, gnl|dasNov1|scaffold_82003 (2850-2568) | |
| 5-179, gnl|echTel1|scaffold_315780 (45483-45778) | |
| 5-179, gnl|hg17|chr6 (30700419-30700717) | |
| 5-179, gnl|Hg17|chr6 (30700426-30700610) | |
| 5-179, gnl|loxAfr1|scaffold_14465 (32572-32250) | |
| 5-179, gnl|mm7|chr17 (34015774-34015577) | |
| 5-179, gnl|monDom2|scaffold_42 (18687148-18686832) | |
| 5-179, gnl|oryCun1|scaffold_204107 (75703-76010) | |
| 5-179, gnl|panTro1|chr5 (31158527-31158825) | |
| 5-179, gnl|rheMac2|chr4 (30203190-30203488) | |
| 5-179, gnl|rn3|chr20 (2990930-2991144) | |
| 437-550, gnl|bosTau2|chr23 (20869385-20869271) | |
| 437-550, gnl|canFam2|chr12 (3441352-3441649) | |
| 437-550, gnl|dasNov1|scaffold_82003 (2850-2568) | |
| 437-550, gnl|echTel1|scaffold_315780 (45483-45778) | |
| 437-550, gnl|hg17|chr6 (30700419-30700717) | |
| 437-550, gnl|Hg17|chr6 (30700596-30700700) | |
| 437-550, gnl|loxAfr1|scaffold_14465 (32572-32250) | |
| 437-550, gnl|mm7|chr17 (34015774-34015577) | |
| 437-550, gnl|monDom2|scaffold_42 (18687148-18686832) | |
| 437-550, gnl|oryCun1|scaffold_204107 (75703-76010) | |
| 437-550, gnl|panTro1|chr5 (31158527-31158825) | |
| 437-550, gnl|rheMac2|chr4 (30203190-30203488) | |
| 437-550, gnl|rn3|chr20 (2990930-2991144) |