Non-Coding RNA Search

Pig1-95A05

Sequence:


               
               ATTGGAGATCTCCAGAGGAAGAAGGCAAGGAAAGTCAGAGGTACCTGGAAGCGGAAGAGA
ACGTAGAGAAGAGAGAGACTCCAGAGCCACCGAGGTCTCTGGAGGAGGAGGAACAGGCGA
CGCCACCCTCTGCACATCAACAGAAGTGGGACGATGTGGGCGGGGTGCAACGAGAACTGG
ATCAGGAAGCGCCCCCTGGGAAGGCTGGAGTGGACAGTGAGGACAAGGCAGACCTGGATC
AGAGAGAACAGGATGGCATCGATGGCAAGGGGGAGGCTGGAGAGCAGGCAGGAGAGGCCA
CGGGGGAGGCCTGGAGCACAGGTGGGGGGCAGCCAGGGAGCCTTGAGCCCGAAGAGCAGA
GCGTCCCAGCTGAGGGAGCCAGTGGGGAGGGAGGCACCCAGGGCTTCCAAGACCCTGAAG
AGAGGCCAGGGCAGGAGGGGGCTCCAGGCTTCCGAGCTCCCCAGGGAATCTCAGAGGTGA
TAGAGCCCGTGTTGGAAGATGATGTGCCCCCTGCGGATGGCCAAGCCTCCCCAGAGGTCG
CCTTGGGGCTGGAGGCTGCTGTGGGCGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTGGAGATCTCCAGAGGAAGAAGGCAAGGAAAGTCAGAGGTACCTGGAAGCGGAAGAGA
ACGTAGAGAAGAGAGAGACTCCAGAGCCACCGAGGTCTCTGGAGGAGGAGGAACAGGCGA
CGCCACCCTCTGCACATCAACAGAAGTGGGACGATGTGGGCGGGGTGCAACGAGAACTGG
ATCAGGAAGCGCCCCCTGGGAAGGCTGGAGTGGACAGTGAGGACAAGGCAGACCTGGATC
AGAGAGAACAGGATGGCATCGATGGCAAGGGGGAGGCTGGAGAGCAGGCAGGAGAGGCCA
CGGGGGAGGCCTGGAGCACAGGTGGGGGGCAGCCAGGGAGCCTTGAGCCCGAAGAGCAGA
GCGTCCCAGCTGAGGGAGCCAGTGGGGAGGGAGGCACCCAGGGCTTCCAAGACCCTGAAG
AGAGGCCAGGGCAGGAGGGGGCTCCAGGCTTCCGAGCTCCCCAGGGAATCTCAGAGGTGA
TAGAGCCCGTGTTGGAAGATGATGTGCCCCCTGCGGATGGCCAAGCCTCCCCAGAGGTCG
CCTTGGGGCTGGAGGCTGCTGTGGGCGAG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               353-549, - strand, RNAz p=0.987791

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               353-549, - strand, RNAz p=0.987791

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               372-532, - strand, RNAmicro p=0.999741

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               372-532, - strand, RNAmicro p=0.999741

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-566, gnl|bosTau2|chr3 (11009551-11008976)
               

               
               2-566, gnl|Hg17|chr1 (153454346-153453780)
               

               
               2-566, gnl|Mm7|chr3 (88091792-88092293)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-566, gnl|bosTau2|chr3 (11009551-11008976)
               

               
               2-566, gnl|Hg17|chr1 (153454346-153453780)
               

               
               2-566, gnl|Mm7|chr3 (88091792-88092293)

	2-566, gnl\|bosTau2\|chr3 (11009551-11008976)
	2-566, gnl\|Hg17\|chr1 (153454346-153453780)
	2-566, gnl\|Mm7\|chr3 (88091792-88092293)