Non-Coding RNA Search

Pig1-95D09

Sequence:


               
               GCCCCCGGGGCCCGGGGCCCCATGACCAGATGCCGCCTAACAAGCCCCCGTGGTTTGACC
AGCCTCACCCTGTTGCTCCTTGGGGCCAACAGCAGCCTCCCGAGCAGCCCCCCTACCCAC
ACCACCAGGGTGGGCCACCCCACTGCCCGCCCTGGAACAACAGCCATGAGGGCATGTGGG
GTGAGCAGCGTGGGGACCCCGGCTGGAACGGCCAGCGCGACGCCCCCTGGAACAGCCAGC
CCGACCCCAACTGGAACAGCCAGTTTGAGGGCCCCTGGAACAACCAGCACGAGCAGCCGC
CCTGGGGCGGGGGCCAGCGCGAGCCGCCCTTCCGCATGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCCCGGGGCCCGGGGCCCCATGACCAGATGCCGCCTAACAAGCCCCCGTGGTTTGACC
AGCCTCACCCTGTTGCTCCTTGGGGCCAACAGCAGCCTCCCGAGCAGCCCCCCTACCCAC
ACCACCAGGGTGGGCCACCCCACTGCCCGCCCTGGAACAACAGCCATGAGGGCATGTGGG
GTGAGCAGCGTGGGGACCCCGGCTGGAACGGCCAGCGCGACGCCCCCTGGAACAGCCAGC
CCGACCCCAACTGGAACAGCCAGTTTGAGGGCCCCTGGAACAACCAGCACGAGCAGCCGC
CCTGGGGCGGGGGCCAGCGCGAGCCGCCCTTCCGCATGCA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               92-251, - strand, RNAz p=0.912337

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               92-251, - strand, RNAz p=0.912337

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               97-235, - strand, RNAmicro p=0.979555

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               97-235, - strand, RNAmicro p=0.979555

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               92-340, gnl|bosTau2|chr7 (5757427-5757179)
               

               
               92-340, gnl|Hg17|chr19 (16497492-16497244)
               

               
               92-340, gnl|Mm7|chr8 (70987403-70987155)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               92-340, gnl|bosTau2|chr7 (5757427-5757179)
               

               
               92-340, gnl|Hg17|chr19 (16497492-16497244)
               

               
               92-340, gnl|Mm7|chr8 (70987403-70987155)

	92-340, gnl\|bosTau2\|chr7 (5757427-5757179)
	92-340, gnl\|Hg17\|chr19 (16497492-16497244)
	92-340, gnl\|Mm7\|chr8 (70987403-70987155)