Pig1-95J09
|
TAAACTCTGAATCACGCCATGTGGCGATCCCTGATGACTCTTTGTCTTCCTTAGAGGAGA
GCAGGATTTCAGTTGCCCCCGCTCCCCATATGATTTTATAACTAACCAGTAAAAATATCT
GAAGGACCTTGGCTCTGAGAAATCCTCACGTGTGGAGATTCTATTCGGATTGTCTTCGCT
CTGATGCCTCGAGGACCGCTGCCTCACCCCCACCTCATTTTCATGACCTTACTCTGTTTC
AGTCAAGACTACCCTTTTATGTTGCACAAATGCAACAGACATCCCTCTCTTTCTTAAAAA
GTATGATCAAAGAGTTACTACATGTAAATACCTATTTCTTTTCTAGGTCACGACATTGAA
AATGGTGTCCCTACTGTACAGTCACCTATCTTTACAGTTTTTCTTACTAAAAACAAACAT
ACAAATTGGTTATTTTTTAGCACAGAGACTTGTGACTCATACTCTATTTTTGCACTTGAA
AGTCAAATTTTGTTATTTTTTAAAATGGTGCGTACTTGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TAAACTCTGAATCACGCCATGTGGCGATCCCTGATGACTCTTTGTCTTCCTTAGAGGAGA
GCAGGATTTCAGTTGCCCCCGCTCCCCATATGATTTTATAACTAACCAGTAAAAATATCT
GAAGGACCTTGGCTCTGAGAAATCCTCACGTGTGGAGATTCTATTCGGATTGTCTTCGCT
CTGATGCCTCGAGGACCGCTGCCTCACCCCCACCTCATTTTCATGACCTTACTCTGTTTC
AGTCAAGACTACCCTTTTATGTTGCACAAATGCAACAGACATCCCTCTCTTTCTTAAAAA
GTATGATCAAAGAGTTACTACATGTAAATACCTATTTCTTTTCTAGGTCACGACATTGAA
AATGGTGTCCCTACTGTACAGTCACCTATCTTTACAGTTTTTCTTACTAAAAACAAACAT
ACAAATTGGTTATTTTTTAGCACAGAGACTTGTGACTCATACTCTATTTTTGCACTTGAA
AGTCAAATTTTGTTATTTTTTAAAATGGTGCGTACTTGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
113-519, gnl|bosTau2|chr4 (59732755-59732356) |
|
113-519, gnl|canFam2|chr16 (12408101-12407557) |
|
113-519, gnl|dasNov1|scaffold_23039 (1374-824) |
|
113-519, gnl|echTel1|scaffold_283143 (39896-40355) |
|
113-519, gnl|hg17|chr7 (138442053-138442597) |
|
113-519, gnl|Hg17|chr7 (138442159-138442582) |
|
113-519, gnl|loxAfr1|scaffold_529 (72234-71689) |
|
113-519, gnl|mm7|chr6 (38436125-38436529) |
|
113-519, gnl|Mm7|chr6 (38436181-38436514) |
|
113-519, gnl|monDom2|scaffold_22 (3007319-3006774) |
|
113-519, gnl|oryCun1|scaffold_71057 (767-223) |
|
113-519, gnl|panTro1|chr6 (141193418-141193962) |
|
113-519, gnl|rheMac2|chr3 (176797454-176797997) |
|
113-519, gnl|rn3|chr4 (66342011-66342446) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
113-519, gnl|bosTau2|chr4 (59732755-59732356) |
|
113-519, gnl|canFam2|chr16 (12408101-12407557) |
|
113-519, gnl|dasNov1|scaffold_23039 (1374-824) |
|
113-519, gnl|echTel1|scaffold_283143 (39896-40355) |
|
113-519, gnl|hg17|chr7 (138442053-138442597) |
|
113-519, gnl|Hg17|chr7 (138442159-138442582) |
|
113-519, gnl|loxAfr1|scaffold_529 (72234-71689) |
|
113-519, gnl|mm7|chr6 (38436125-38436529) |
|
113-519, gnl|Mm7|chr6 (38436181-38436514) |
|
113-519, gnl|monDom2|scaffold_22 (3007319-3006774) |
|
113-519, gnl|oryCun1|scaffold_71057 (767-223) |
|
113-519, gnl|panTro1|chr6 (141193418-141193962) |
|
113-519, gnl|rheMac2|chr3 (176797454-176797997) |
|
113-519, gnl|rn3|chr4 (66342011-66342446) |
