Non-Coding RNA Search

Pig1-95J10

Sequence:


               
               AGCTAGGCAGCTCCTTCCCGGACGCTGGGGACCCTCTACCTCTCTTCCAGATGGAAAGGT
GACACGACCTTACGGTAGACCCCAGAAGTGAGGCCCCAGGATGACGGAACCCGAGGCCAT
GGCCCTGCTGGAGGTGAAGGGGCCTGCAGCCCTGGAGAAAAGCCCACCCCAGGCCTTGGT
CCCCAATGGCGAGAAGACAGAGGGGGAGGGTGGAGCTGAGTCTCCCAGAGCCGAGTCCTC
CAGAGTGGGGTCTTCAGCTGGGTCTCCCACAGCCGGACAGGGGACTGAGGATGGGCTAGA
TAGCACAGTAAGTGAGGCTGCCACCTTGCCCTGGGGGGCTGGCCCCCAGCCCAGTGCCCC
GTTCCCAGATCCCCCAGGCTGGAGAGACATTGAGCCTGAGCCCCTCGAGTCAGAGCCAGC
CACCAAGCTGGAGGAGTTGCCCGAAGATGACGCTTGCCTGCTGCCTGAGAAGGCGGCCCG
AGCCTTCGTGCCCATCGACTTGCAGTGCATTGAGCGGCGGCCACAGGAGGACCTTGCTGT
GCGCTGTGAGGCGAGCGAGGGCGAACGCCGCCGGACCTTCCTGCCCACCCGGGCCGCCCC
CGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCTAGGCAGCTCCTTCCCGGACGCTGGGGACCCTCTACCTCTCTTCCAGATGGAAAGGT
GACACGACCTTACGGTAGACCCCAGAAGTGAGGCCCCAGGATGACGGAACCCGAGGCCAT
GGCCCTGCTGGAGGTGAAGGGGCCTGCAGCCCTGGAGAAAAGCCCACCCCAGGCCTTGGT
CCCCAATGGCGAGAAGACAGAGGGGGAGGGTGGAGCTGAGTCTCCCAGAGCCGAGTCCTC
CAGAGTGGGGTCTTCAGCTGGGTCTCCCACAGCCGGACAGGGGACTGAGGATGGGCTAGA
TAGCACAGTAAGTGAGGCTGCCACCTTGCCCTGGGGGGCTGGCCCCCAGCCCAGTGCCCC
GTTCCCAGATCCCCCAGGCTGGAGAGACATTGAGCCTGAGCCCCTCGAGTCAGAGCCAGC
CACCAAGCTGGAGGAGTTGCCCGAAGATGACGCTTGCCTGCTGCCTGAGAAGGCGGCCCG
AGCCTTCGTGCCCATCGACTTGCAGTGCATTGAGCGGCGGCCACAGGAGGACCTTGCTGT
GCGCTGTGAGGCGAGCGAGGGCGAACGCCGCCGGACCTTCCTGCCCACCCGGGCCGCCCC
CGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|16552326|dbj|BAB71290.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|16552326|dbj|BAB71290.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               137-376, - strand, RNAz p=0.996039

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               137-376, - strand, RNAz p=0.996039

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               58-599, gnl|bosTau2|chr3 (10360588-10361129)
               

               
               58-599, gnl|Hg17|chr1 (153068048-153068586)
               

               
               58-599, gnl|Mm7|chr3 (88447483-88446954)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               58-599, gnl|bosTau2|chr3 (10360588-10361129)
               

               
               58-599, gnl|Hg17|chr1 (153068048-153068586)
               

               
               58-599, gnl|Mm7|chr3 (88447483-88446954)

	58-599, gnl\|bosTau2\|chr3 (10360588-10361129)
	58-599, gnl\|Hg17\|chr1 (153068048-153068586)
	58-599, gnl\|Mm7\|chr3 (88447483-88446954)