Non-Coding RNA Search

Pig1-97D06

Sequence:


               
               AAATAAATCTGTCTTTTTTTGTACTTAAGATTTTTAAAATGAACTTGTAATAGTCAAGTT
GGTTAATAGAGTTTCCCCCAGAAGAAAAGAACAAATTATCTGGCCACTGAATTGTTGAAT
TCCAATAGTTTCTAATACACTTAAATTCTTTAAAGATAACGCATATAGATATAGAAAGAA
ACAACTTGAAGGTAAGTTTTTAGATGTGCTTTCGCTAAGATCGCCTTTTCTAATGCTCAT
ATTCTTGATTGAGATAATGTTAAGCATTTTTCATCTCTTTTTATTTTAGAAATCATTTGT
ATTTCGCAATGAACTGATTAAATTAGTATATTCACCATTGAAAGGTGAACATTGCTTCCG
TGTGAAACCAAGGTTAAAAAATTCTCATAATGCCCTTGATTCAGTTAAGACTCAAACCTT
CTTTTTGCCAGGAAATGTATATGTACTGTAATTAAAGCTTTTATTTAAAAAGGGAACAAA
ATAAACCCTTTGCATTTTGTGAATTTTTCATAAGTTCTAAGGCTCCAAGCCATCAGTAAC
TCTAAGTAAGTGTAAATGCCTTGTAATTTTCCAGCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATAAATCTGTCTTTTTTTGTACTTAAGATTTTTAAAATGAACTTGTAATAGTCAAGTT
GGTTAATAGAGTTTCCCCCAGAAGAAAAGAACAAATTATCTGGCCACTGAATTGTTGAAT
TCCAATAGTTTCTAATACACTTAAATTCTTTAAAGATAACGCATATAGATATAGAAAGAA
ACAACTTGAAGGTAAGTTTTTAGATGTGCTTTCGCTAAGATCGCCTTTTCTAATGCTCAT
ATTCTTGATTGAGATAATGTTAAGCATTTTTCATCTCTTTTTATTTTAGAAATCATTTGT
ATTTCGCAATGAACTGATTAAATTAGTATATTCACCATTGAAAGGTGAACATTGCTTCCG
TGTGAAACCAAGGTTAAAAAATTCTCATAATGCCCTTGATTCAGTTAAGACTCAAACCTT
CTTTTTGCCAGGAAATGTATATGTACTGTAATTAAAGCTTTTATTTAAAAAGGGAACAAA
ATAAACCCTTTGCATTTTGTGAATTTTTCATAAGTTCTAAGGCTCCAAGCCATCAGTAAC
TCTAAGTAAGTGTAAATGCCTTGTAATTTTCCAGCAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               276-410, - strand, RNAz p=0.813244

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               276-410, - strand, RNAz p=0.813244

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-577, gnl|bosTau2|chr16 (14438100-14437529)
               

               
               1-577, gnl|Hg17|chr1 (219430333-219430922)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-577, gnl|bosTau2|chr16 (14438100-14437529)
               

               
               1-577, gnl|Hg17|chr1 (219430333-219430922)

	1-577, gnl\|bosTau2\|chr16 (14438100-14437529)
	1-577, gnl\|Hg17\|chr1 (219430333-219430922)