Non-Coding RNA Search

Pig1-97M18

Sequence:


               
               CAGCAGGAACCAGGTTCCAAGCGCTGGCGCCCGGGCCGCGGGAAGGAGGCGACTTCCCTC
CCGGCGGCGGGAGCCTCCTCGGCCCCGGAGAGCTGGCGGCGGCGGCGGCCTCCTCGGAGC
GGCAGTCCCTAACGCTCCACGCCATGCAGGGGCCGCCTGGCGAGCTCCCTTAGGAGTGCT
GTCCGGCCTGATTGGAACCGTGGAGAAGAGGCCCCGCGATTGATGAGTTTGCCCTGGACA
TTGGTGAACAGGTGAAACGGGAGGCCAACATGGGACAGAAGGTCACTGGAGGAATCAAGA
CCGTGGACATGAGGGACCCCACATACCGGCCCTTGAAGCAGGAGCTCCAGGGTCTGGACT
ACTGCAAGCCCACCCGCCTGGACCTGCTGCTGGACATGCCGCCCGTGTCCTACGACGTCC
AGCTGCTCCACTCCTGGAACAACAACGACCGCTCGCTCAACGTCTTCGTGAAGGAGGACG
ACAAGCTCATCTTTCACCGGCATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCAGGAACCAGGTTCCAAGCGCTGGCGCCCGGGCCGCGGGAAGGAGGCGACTTCCCTC
CCGGCGGCGGGAGCCTCCTCGGCCCCGGAGAGCTGGCGGCGGCGGCGGCCTCCTCGGAGC
GGCAGTCCCTAACGCTCCACGCCATGCAGGGGCCGCCTGGCGAGCTCCCTTAGGAGTGCT
GTCCGGCCTGATTGGAACCGTGGAGAAGAGGCCCCGCGATTGATGAGTTTGCCCTGGACA
TTGGTGAACAGGTGAAACGGGAGGCCAACATGGGACAGAAGGTCACTGGAGGAATCAAGA
CCGTGGACATGAGGGACCCCACATACCGGCCCTTGAAGCAGGAGCTCCAGGGTCTGGACT
ACTGCAAGCCCACCCGCCTGGACCTGCTGCTGGACATGCCGCCCGTGTCCTACGACGTCC
AGCTGCTCCACTCCTGGAACAACAACGACCGCTCGCTCAACGTCTTCGTGAAGGAGGACG
ACAAGCTCATCTTTCACCGGCATC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|38047765|gb|AAR09785.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|38047765|gb|AAR09785.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               234-393, + strand, RNAz p=0.572996

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               234-393, + strand, RNAz p=0.572996

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of BC015711, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of BC015711, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               156-504, gnl|bosTau2|chr16 (32103857-32103509)
               

               
               156-504, gnl|Hg17|chr1 (9350102-9350451)
               

               
               156-504, gnl|Mm7|chr4 (148896765-148896417)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               156-504, gnl|bosTau2|chr16 (32103857-32103509)
               

               
               156-504, gnl|Hg17|chr1 (9350102-9350451)
               

               
               156-504, gnl|Mm7|chr4 (148896765-148896417)

	156-504, gnl\|bosTau2\|chr16 (32103857-32103509)
	156-504, gnl\|Hg17\|chr1 (9350102-9350451)
	156-504, gnl\|Mm7\|chr4 (148896765-148896417)