Pig1-98A24
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AACTGATTCTCTCAGAAATAGTTTTTGGAGTCCTCAGATGCTACGATCTCGATATCTACT GTACCCTGGCTGGTATGAAGGTAAATTTGATGCTGGATCAGTCTTTCCATTAATGGTTCA GATCTGTGTATGGTTTGGTCGTCCCTTGAGAGAAGACTCGCTTTATGGCCAAGTGTAAAG CAATGCAGTCCTCCATCAAGCCAAGTCCCTTCTCTGGAAATATCTACCACATCCTGGGCA AAGTGAAGTTTTCAGACTCCGAGAGGACCATGGAGGTCTGCCACAACACTCTGGCCAATT CCTTGAGCATCATGCCAATTTTGGAGGGACCCACGCCACCACCTGACTCAAGAAGCACAC CTCAAGGCGGTAGCGGGCAGCAGGAATGCTACCTTGTGTTCATCGGCTGCTCCCTGAAGG AAGAAAGTGTCAAGGACTGGCTGCGGCAGTCAGCTAAGCAGAAGCCGCAGAGGAAAGCCC TGAAGACCAGGGGGATGCTGACCCAGCAGGAGATCAGGAACATCCATGTGAAACGCCACC TGGATCCCCTACCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AACTGATTCTCTCAGAAATAGTTTTTGGAGTCCTCAGATGCTACGATCTCGATATCTACT GTACCCTGGCTGGTATGAAGGTAAATTTGATGCTGGATCAGTCTTTCCATTAATGGTTCA GATCTGTGTATGGTTTGGTCGTCCCTTGAGAGAAGACTCGCTTTATGGCCAAGTGTAAAG CAATGCAGTCCTCCATCAAGCCAAGTCCCTTCTCTGGAAATATCTACCACATCCTGGGCA AAGTGAAGTTTTCAGACTCCGAGAGGACCATGGAGGTCTGCCACAACACTCTGGCCAATT CCTTGAGCATCATGCCAATTTTGGAGGGACCCACGCCACCACCTGACTCAAGAAGCACAC CTCAAGGCGGTAGCGGGCAGCAGGAATGCTACCTTGTGTTCATCGGCTGCTCCCTGAAGG AAGAAAGTGTCAAGGACTGGCTGCGGCAGTCAGCTAAGCAGAAGCCGCAGAGGAAAGCCC TGAAGACCAGGGGGATGCTGACCCAGCAGGAGATCAGGAACATCCATGTGAAACGCCACC TGGATCCCCTACCTG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 330-449, - strand, RNAz p=0.905523 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 330-449, - strand, RNAz p=0.905523 |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 72-180, gnl|bosTau2|chr13 (34650212-34650105) | |
| 72-180, gnl|canFam2|chr24 (21038241-21038100) | |
| 72-180, gnl|echTel1|scaffold_295720 (7344-7200) | |
| 72-180, gnl|fr1|chrUn (225625507-225625628) | |
| 72-180, gnl|galGal2|chr4 (89098502-89098646) | |
| 72-180, gnl|hg17|chr20 (3188562-3188707) | |
| 72-180, gnl|Hg17|chr20 (3188675-3188568) | |
| 72-180, gnl|loxAfr1|scaffold_99598 (158-302) | |
| 72-180, gnl|mm7|chr2 (130454244-130454387) | |
| 72-180, gnl|Mm7|chr2 (130454357-130454250) | |
| 72-180, gnl|monDom2|scaffold_10 (49200143-49200263) | |
| 72-180, gnl|oryCun1|scaffold_200443 (142325-142183) | |
| 72-180, gnl|panTro1|chr21 (3169161-3169286) | |
| 72-180, gnl|rheMac2|chr10 (36573880-36574023) | |
| 72-180, gnl|rn3|chr3 (118245000-118245143) | |
| 72-180, gnl|xenTro1|scaffold_990 (96848-96972) | |
| 250-461, gnl|bosTau2|chr13 (34645389-34645178) | |
| 250-461, gnl|canFam2|chr24 (21040572-21040336) | |
| 250-461, gnl|echTel1|scaffold_295720 (10608-10368) | |
| 250-461, gnl|fr1|chrUn (225624202-225624404) | |
| 250-461, gnl|galGal2|chr4 (89097405-89097626) | |
| 250-461, gnl|hg17|chr20 (3184650-3184892) | |
| 250-461, gnl|Hg17|chr20 (3184863-3184652) | |
| 250-461, gnl|mm7|chr2 (130453111-130453348) | |
| 250-461, gnl|Mm7|chr2 (130453321-130453113) | |
| 250-461, gnl|monDom2|scaffold_10 (49197275-49197520) | |
| 250-461, gnl|oryCun1|scaffold_200443 (143755-143518) | |
| 250-461, gnl|panTro1|chr21 (3165280-3165522) | |
| 250-461, gnl|rheMac2|chr10 (36569914-36570156) | |
| 250-461, gnl|rn3|chr3 (118244012-118244249) | |
| 250-461, gnl|tetNig1|chr10 (12195140-12195315) | |
| 250-461, gnl|xenTro1|scaffold_990 (95784-96024) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 72-180, gnl|bosTau2|chr13 (34650212-34650105) | |
| 72-180, gnl|canFam2|chr24 (21038241-21038100) | |
| 72-180, gnl|echTel1|scaffold_295720 (7344-7200) | |
| 72-180, gnl|fr1|chrUn (225625507-225625628) | |
| 72-180, gnl|galGal2|chr4 (89098502-89098646) | |
| 72-180, gnl|hg17|chr20 (3188562-3188707) | |
| 72-180, gnl|Hg17|chr20 (3188675-3188568) | |
| 72-180, gnl|loxAfr1|scaffold_99598 (158-302) | |
| 72-180, gnl|mm7|chr2 (130454244-130454387) | |
| 72-180, gnl|Mm7|chr2 (130454357-130454250) | |
| 72-180, gnl|monDom2|scaffold_10 (49200143-49200263) | |
| 72-180, gnl|oryCun1|scaffold_200443 (142325-142183) | |
| 72-180, gnl|panTro1|chr21 (3169161-3169286) | |
| 72-180, gnl|rheMac2|chr10 (36573880-36574023) | |
| 72-180, gnl|rn3|chr3 (118245000-118245143) | |
| 72-180, gnl|xenTro1|scaffold_990 (96848-96972) | |
| 250-461, gnl|bosTau2|chr13 (34645389-34645178) | |
| 250-461, gnl|canFam2|chr24 (21040572-21040336) | |
| 250-461, gnl|echTel1|scaffold_295720 (10608-10368) | |
| 250-461, gnl|fr1|chrUn (225624202-225624404) | |
| 250-461, gnl|galGal2|chr4 (89097405-89097626) | |
| 250-461, gnl|hg17|chr20 (3184650-3184892) | |
| 250-461, gnl|Hg17|chr20 (3184863-3184652) | |
| 250-461, gnl|mm7|chr2 (130453111-130453348) | |
| 250-461, gnl|Mm7|chr2 (130453321-130453113) | |
| 250-461, gnl|monDom2|scaffold_10 (49197275-49197520) | |
| 250-461, gnl|oryCun1|scaffold_200443 (143755-143518) | |
| 250-461, gnl|panTro1|chr21 (3165280-3165522) | |
| 250-461, gnl|rheMac2|chr10 (36569914-36570156) | |
| 250-461, gnl|rn3|chr3 (118244012-118244249) | |
| 250-461, gnl|tetNig1|chr10 (12195140-12195315) | |
| 250-461, gnl|xenTro1|scaffold_990 (95784-96024) |