Non-Coding RNA Search

Pig1-98M23

Sequence:


               
               ATTGACCAAAGCCCGTAATGATTTTTTGGATAGGTTGGCAGGATGAGGTAGGGGAAGGGA
GTGTGAGAGTCATTTTTCTTTTGACCTTGGTTTTGAATAAAACTGGCTGGGGAAAATACC
TGAGACCGTGTGAACTGATGGGCTCCCTCTCTGGGGGATCTGGCAAGGGTGGAGTGTGGA
GAGCCCTCTCCATAACCATGGCGACTCCCCCAGCCCTCTGTCCTTTTCGCTTTGTCTTCT
CTGAACTGCTTCTTACTTCTGGCCAAGAGTCTCTCCTTTTCACTTGCTTTGTTCTTAGTT
GGCCCAAGAACATATCTTCCAGTTGATGAATGTTCAGTTTTCTTAACATTTCATCAGTCA
CCTGACGATTTTTAAATCCCATTTGTGAACATATTCTTTCTCTCTCGTCTTCCCCTCACA
TTTGAAATGGATAAAGCAGAAGTCTTATTTTTCATGCCTACCTTTCCAGTCACATCTGCA
CCATCCCTGGACTCTCTTTAAGCCATTCTGTTAGATTCTTTGCTGAAATGAAATATATGA
TTAAATAAATGGGAAGGCCCTTAGTCGTGATTGATAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTGACCAAAGCCCGTAATGATTTTTTGGATAGGTTGGCAGGATGAGGTAGGGGAAGGGA
GTGTGAGAGTCATTTTTCTTTTGACCTTGGTTTTGAATAAAACTGGCTGGGGAAAATACC
TGAGACCGTGTGAACTGATGGGCTCCCTCTCTGGGGGATCTGGCAAGGGTGGAGTGTGGA
GAGCCCTCTCCATAACCATGGCGACTCCCCCAGCCCTCTGTCCTTTTCGCTTTGTCTTCT
CTGAACTGCTTCTTACTTCTGGCCAAGAGTCTCTCCTTTTCACTTGCTTTGTTCTTAGTT
GGCCCAAGAACATATCTTCCAGTTGATGAATGTTCAGTTTTCTTAACATTTCATCAGTCA
CCTGACGATTTTTAAATCCCATTTGTGAACATATTCTTTCTCTCTCGTCTTCCCCTCACA
TTTGAAATGGATAAAGCAGAAGTCTTATTTTTCATGCCTACCTTTCCAGTCACATCTGCA
CCATCCCTGGACTCTCTTTAAGCCATTCTGTTAGATTCTTTGCTGAAATGAAATATATGA
TTAAATAAATGGGAAGGCCCTTAGTCGTGATTGATAAC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               180-294, - strand, RNAz p=0.529228

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               180-294, - strand, RNAz p=0.529228

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-578, gnl|bosTau2|chr1 (63356614-63357174)
               

               
               2-578, gnl|Hg17|chr3 (170843322-170842584)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-578, gnl|bosTau2|chr1 (63356614-63357174)
               

               
               2-578, gnl|Hg17|chr3 (170843322-170842584)

	2-578, gnl\|bosTau2\|chr1 (63356614-63357174)
	2-578, gnl\|Hg17\|chr3 (170843322-170842584)