Non-Coding RNA Search

Pig1-99K14

Sequence:


               
               GCTGACTGGATGAGGCCAGATCCCTTATGACCCACTCGGGTTCGAGTTGGAACGGACGCT
GGTGTCCCCGGGCCCTTGGTCCGAGCTGGCACCTTCGTGCATCAGGGTGGCCTTTCTTTG
GTTTTTGGTTTTCGGCTGATTCCGGGACACGTGTGAGCAACCGGGCACGGTTTGGGGAGG
AAGGCCCTGGGAAAGCGCGAGGCCTCTGCCGCCCAGCCGTGGAGGGGACCGCTGAGATCT
CTGAGCCTGGCCTTGTTCCCGGGAATGTGACCCCCCGCCTCTTGTCACCTTACAGAATTG
CTATTTAGGGACCGCTACAGCCCGGGTCTTCCCAGTAGACGCTTCAGTACACGTGGGATT
GGAGACGTCAGGGGTCTGCAGCCATGGCGGTGACCCTTTTGGAGGACTGGTGCCGGGGCA
TGGATGTGGACTTCCGGAGGTCCCTGTTGGTGCATCCCGGAGGACTGTGGGCAGGCGGAA
ATTGAGGAGACCTTGAATGGGGTCCTCTCCCCACTGGGCCCATACTTCGTGCTCAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGACTGGATGAGGCCAGATCCCTTATGACCCACTCGGGTTCGAGTTGGAACGGACGCT
GGTGTCCCCGGGCCCTTGGTCCGAGCTGGCACCTTCGTGCATCAGGGTGGCCTTTCTTTG
GTTTTTGGTTTTCGGCTGATTCCGGGACACGTGTGAGCAACCGGGCACGGTTTGGGGAGG
AAGGCCCTGGGAAAGCGCGAGGCCTCTGCCGCCCAGCCGTGGAGGGGACCGCTGAGATCT
CTGAGCCTGGCCTTGTTCCCGGGAATGTGACCCCCCGCCTCTTGTCACCTTACAGAATTG
CTATTTAGGGACCGCTACAGCCCGGGTCTTCCCAGTAGACGCTTCAGTACACGTGGGATT
GGAGACGTCAGGGGTCTGCAGCCATGGCGGTGACCCTTTTGGAGGACTGGTGCCGGGGCA
TGGATGTGGACTTCCGGAGGTCCCTGTTGGTGCATCCCGGAGGACTGTGGGCAGGCGGAA
ATTGAGGAGACCTTGAATGGGGTCCTCTCCCCACTGGGCCCATACTTCGTGCTCAAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               423-536, - strand, RNAz p=0.52044

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               423-536, - strand, RNAz p=0.52044

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               127-536, gnl|bosTau2|chr18 (49530953-49530539)
               

               
               127-536, gnl|Hg17|chr19 (51666380-51665963)
               

               
               127-536, gnl|Mm7|chr7 (14723524-14723967)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               127-536, gnl|bosTau2|chr18 (49530953-49530539)
               

               
               127-536, gnl|Hg17|chr19 (51666380-51665963)
               

               
               127-536, gnl|Mm7|chr7 (14723524-14723967)

	127-536, gnl\|bosTau2\|chr18 (49530953-49530539)
	127-536, gnl\|Hg17\|chr19 (51666380-51665963)
	127-536, gnl\|Mm7\|chr7 (14723524-14723967)