Non-Coding RNA Search

Pig2-100G13

Sequence:


               
               AAAAGCAGGTTGCTTATAGCTCTGGAAAATAGAAGTATTGTCTTCCTTCCAATGTAGAGG
GCAGGTGTGCTTACTGCCGTTTTAAAAGGTTCACGTTTCCAATAAGCTTAGTCTTCCTCT
CCTGTAACACAACCCACTGCATGTACAGGTGTTACATGACTCTTTTTCACAATGCTCTGT
GAATTGGGGCTCAGGCAACTGGCACAAGAAAATGCTGATAACTGACTACTGCTCCTGGTA
tgactagtaaagttgtttgtctctgactcaaaaatcttaggtcttctgccaatacccatg
aaactgacaggctaacttgttagcttggaagtagggtcaaatctcaaagccttcactgtt
ctttacaCAATTTGGTGAATTTTGACAAATATACAGTCAAGTCATAGTAGGTTTCTGTCA
CCACCACAATCAAGTCATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAGCAGGTTGCTTATAGCTCTGGAAAATAGAAGTATTGTCTTCCTTCCAATGTAGAGG
GCAGGTGTGCTTACTGCCGTTTTAAAAGGTTCACGTTTCCAATAAGCTTAGTCTTCCTCT
CCTGTAACACAACCCACTGCATGTACAGGTGTTACATGACTCTTTTTCACAATGCTCTGT
GAATTGGGGCTCAGGCAACTGGCACAAGAAAATGCTGATAACTGACTACTGCTCCTGGTA
tgactagtaaagttgtttgtctctgactcaaaaatcttaggtcttctgccaatacccatg
aaactgacaggctaacttgttagcttggaagtagggtcaaatctcaaagccttcactgtt
ctttacaCAATTTGGTGAATTTTGACAAATATACAGTCAAGTCATAGTAGGTTTCTGTCA
CCACCACAATCAAGTCATA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               255-393, - strand, RNAz p=0.709659

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               255-393, - strand, RNAz p=0.709659

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

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               61-393, gnl|bosTau2|chr20 (13301330-13301655)
               

               
               61-393, gnl|canFam2|chr2 (46099635-46100036)
               

               
               61-393, gnl|hg17|chr5 (55309600-55309999)
               

               
               61-393, gnl|Hg17|chr5 (55309919-55309599)
               

               
               61-393, gnl|panTro1|chr4 (60887629-60887228)
               

               
               61-393, gnl|rheMac2|chr6 (53632629-53633028)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               61-393, gnl|bosTau2|chr20 (13301330-13301655)
               

               
               61-393, gnl|canFam2|chr2 (46099635-46100036)
               

               
               61-393, gnl|hg17|chr5 (55309600-55309999)
               

               
               61-393, gnl|Hg17|chr5 (55309919-55309599)
               

               
               61-393, gnl|panTro1|chr4 (60887629-60887228)
               

               
               61-393, gnl|rheMac2|chr6 (53632629-53633028)

	61-393, gnl\|bosTau2\|chr20 (13301330-13301655)
	61-393, gnl\|canFam2\|chr2 (46099635-46100036)
	61-393, gnl\|hg17\|chr5 (55309600-55309999)
	61-393, gnl\|Hg17\|chr5 (55309919-55309599)
	61-393, gnl\|panTro1\|chr4 (60887629-60887228)
	61-393, gnl\|rheMac2\|chr6 (53632629-53633028)