Pig2-101F11
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAACCGAGGCCCCTGACCTTCACCACCTTTACCTCCTGCACCCAGCCTTCCCCTCGATTC TTCTGGATCTGGCCAATGCCACGGGGACCGTGACGGCTTCAGAGGTTGGGATCAACGACC TCTGGAAAGATGCCTTTTATGTTACCAGGACAACAGGGCCCAGCTCCGAAGGCCACCCGG CACCCCTGGTGGTCAGCAAGCTTAGTCTGCGGTGGGCGCTGATGGAGGGCCAAGTGGTCC AGCTAAAGGAGACCACCCCCAAAATTGGCCGCGGGGAGCTGCGGAGATTCCTCTCTAGGA TAAAGTTCGTTGATTCTCCCTACCAGATGTAGTCTGACAGACTCTTCAGTTTCAGAAGAT GTGAACTCTCCAGCTGGGGTTCACTCAGCTCCTTGGAGAGGAAGACTTGTCACCCGACTC CACCACCTCCGTGTGACTGTCGCCAAGCACTTTGGAAGGACTCGCAGCTCTTGGGTAACA GCACGGTCCGTTCGGCTGGGGCATCTCACCTGCCTTTCCAGTCCCTGTGTTAGTCCCCTC TTAGCACTGTGTGTGGAGAGTTTGGAAATGTGAATTGTACTGTGGATTTTTTTTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAACCGAGGCCCCTGACCTTCACCACCTTTACCTCCTGCACCCAGCCTTCCCCTCGATTC TTCTGGATCTGGCCAATGCCACGGGGACCGTGACGGCTTCAGAGGTTGGGATCAACGACC TCTGGAAAGATGCCTTTTATGTTACCAGGACAACAGGGCCCAGCTCCGAAGGCCACCCGG CACCCCTGGTGGTCAGCAAGCTTAGTCTGCGGTGGGCGCTGATGGAGGGCCAAGTGGTCC AGCTAAAGGAGACCACCCCCAAAATTGGCCGCGGGGAGCTGCGGAGATTCCTCTCTAGGA TAAAGTTCGTTGATTCTCCCTACCAGATGTAGTCTGACAGACTCTTCAGTTTCAGAAGAT GTGAACTCTCCAGCTGGGGTTCACTCAGCTCCTTGGAGAGGAAGACTTGTCACCCGACTC CACCACCTCCGTGTGACTGTCGCCAAGCACTTTGGAAGGACTCGCAGCTCTTGGGTAACA GCACGGTCCGTTCGGCTGGGGCATCTCACCTGCCTTTCCAGTCCCTGTGTTAGTCCCCTC TTAGCACTGTGTGTGGAGAGTTTGGAAATGTGAATTGTACTGTGGATTTTTTTTTT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 144-263, + strand, RNAz p=0.609191 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 144-263, + strand, RNAz p=0.609191 |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 105-329, gnl|bosTau2|chr5 (56730523-56730299) | |
| 105-329, gnl|canFam2|chr27 (36323705-36323392) | |
| 105-329, gnl|dasNov1|scaffold_1081 (22768-23078) | |
| 105-329, gnl|echTel1|scaffold_280125 (47920-47612) | |
| 105-329, gnl|galGal2|chr1 (45034748-45035053) | |
| 105-329, gnl|hg17|chr12 (13123909-13124221) | |
| 105-329, gnl|Hg17|chr12 (13123989-13124213) | |
| 105-329, gnl|loxAfr1|scaffold_406 (6172-6488) | |
| 105-329, gnl|mm7|chr6 (135247516-135247805) | |
| 105-329, gnl|Mm7|chr6 (135247577-135247801) | |
| 105-329, gnl|monDom2|scaffold_31 (18253418-18253126) | |
| 105-329, gnl|oryCun1|scaffold_41493 (26-331) | |
| 105-329, gnl|panTro1|chrUn_random (39378710-39379022) | |
| 105-329, gnl|rheMac2|chr11 (13453158-13453470) | |
| 105-329, gnl|rn3|chr4 (172432775-172433064) | |
| 366-592, gnl|bosTau2|chr5 (56729355-56729122) | |
| 366-592, gnl|canFam2|chr27 (36322651-36322350) | |
| 366-592, gnl|echTel1|scaffold_280125 (47098-46825) | |
| 366-592, gnl|hg17|chr12 (13124808-13125111) | |
| 366-592, gnl|Hg17|chr12 (13124885-13125113) | |
| 366-592, gnl|mm7|chr6 (135248283-135248567) | |
| 366-592, gnl|Mm7|chr6 (135248358-135248571) | |
| 366-592, gnl|monDom2|scaffold_31 (18252102-18251797) | |
| 366-592, gnl|oryCun1|scaffold_199234 (104984-104715) | |
| 366-592, gnl|panTro1|chrUn_random (39379609-39379912) | |
| 366-592, gnl|rheMac2|chr11 (13454047-13454347) | |
| 366-592, gnl|rn3|chr4 (172433531-172433811) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 105-329, gnl|bosTau2|chr5 (56730523-56730299) | |
| 105-329, gnl|canFam2|chr27 (36323705-36323392) | |
| 105-329, gnl|dasNov1|scaffold_1081 (22768-23078) | |
| 105-329, gnl|echTel1|scaffold_280125 (47920-47612) | |
| 105-329, gnl|galGal2|chr1 (45034748-45035053) | |
| 105-329, gnl|hg17|chr12 (13123909-13124221) | |
| 105-329, gnl|Hg17|chr12 (13123989-13124213) | |
| 105-329, gnl|loxAfr1|scaffold_406 (6172-6488) | |
| 105-329, gnl|mm7|chr6 (135247516-135247805) | |
| 105-329, gnl|Mm7|chr6 (135247577-135247801) | |
| 105-329, gnl|monDom2|scaffold_31 (18253418-18253126) | |
| 105-329, gnl|oryCun1|scaffold_41493 (26-331) | |
| 105-329, gnl|panTro1|chrUn_random (39378710-39379022) | |
| 105-329, gnl|rheMac2|chr11 (13453158-13453470) | |
| 105-329, gnl|rn3|chr4 (172432775-172433064) | |
| 366-592, gnl|bosTau2|chr5 (56729355-56729122) | |
| 366-592, gnl|canFam2|chr27 (36322651-36322350) | |
| 366-592, gnl|echTel1|scaffold_280125 (47098-46825) | |
| 366-592, gnl|hg17|chr12 (13124808-13125111) | |
| 366-592, gnl|Hg17|chr12 (13124885-13125113) | |
| 366-592, gnl|mm7|chr6 (135248283-135248567) | |
| 366-592, gnl|Mm7|chr6 (135248358-135248571) | |
| 366-592, gnl|monDom2|scaffold_31 (18252102-18251797) | |
| 366-592, gnl|oryCun1|scaffold_199234 (104984-104715) | |
| 366-592, gnl|panTro1|chrUn_random (39379609-39379912) | |
| 366-592, gnl|rheMac2|chr11 (13454047-13454347) | |
| 366-592, gnl|rn3|chr4 (172433531-172433811) |