Non-Coding RNA Search

Pig2-101M19

Sequence:


               
               ATCAGTGCCTGCTGCCCTCTCTGGTTGCTTCCTTCTCCACTCTGTATTTAGATCTGGGAT
GGGGAACGTGCTTTTTGGCATTGGGTAGTTTTGGCTGGTCAAGGGAGAGCCCTGCCTGCC
AGGAATGCTAGACATTCTGGAGGCGTGGGAGGTTGGGCAGCTTCATCTTTTTTAAACGTG
CTGAGTTCTAACTGCACAGGAATGAAGTGTATGTGTGTTGCACGCCTTTCTTTAGAAATT
AGTTATTTGCATATTGCTGATAAATTTTTTTTTAACATGCCCTTATTCTGGTTTTGTGAG
AGTGCTTTATGATGAAAAACCTCCAGCATAAATTTTTCAGATTAAAAAAAAAATCTCCAA
GTAAATCTTACCATTCAGAAATTGTGCTGAAAGAGAAGATTTCTGAAATGTATGGCAATT
TTTCCTGAGGTAGAAATAGTAGGATTGAGAACTATTAAATTCAGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCAGTGCCTGCTGCCCTCTCTGGTTGCTTCCTTCTCCACTCTGTATTTAGATCTGGGAT
GGGGAACGTGCTTTTTGGCATTGGGTAGTTTTGGCTGGTCAAGGGAGAGCCCTGCCTGCC
AGGAATGCTAGACATTCTGGAGGCGTGGGAGGTTGGGCAGCTTCATCTTTTTTAAACGTG
CTGAGTTCTAACTGCACAGGAATGAAGTGTATGTGTGTTGCACGCCTTTCTTTAGAAATT
AGTTATTTGCATATTGCTGATAAATTTTTTTTTAACATGCCCTTATTCTGGTTTTGTGAG
AGTGCTTTATGATGAAAAACCTCCAGCATAAATTTTTCAGATTAAAAAAAAAATCTCCAA
GTAAATCTTACCATTCAGAAATTGTGCTGAAAGAGAAGATTTCTGAAATGTATGGCAATT
TTTCCTGAGGTAGAAATAGTAGGATTGAGAACTATTAAATTCAGAT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               348-466, - strand, RNAz p=0.845772

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               348-466, - strand, RNAz p=0.845772

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-466, gnl|bosTau2|chr3 (39668257-39668717)
               

               
               1-466, gnl|Hg17|chr1 (94414024-94413547)
               

               
               1-466, gnl|Mm7|chr3 (121737529-121738009)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-466, gnl|bosTau2|chr3 (39668257-39668717)
               

               
               1-466, gnl|Hg17|chr1 (94414024-94413547)
               

               
               1-466, gnl|Mm7|chr3 (121737529-121738009)

	1-466, gnl\|bosTau2\|chr3 (39668257-39668717)
	1-466, gnl\|Hg17\|chr1 (94414024-94413547)
	1-466, gnl\|Mm7\|chr3 (121737529-121738009)